Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0725 ATGGTGGGGAAGAACAAGATGCAGGTGCAGGCATTTCTGGTGTTGTTCTTCTTCTACTGTTGCATTGGTTGTTATGGTAGGGGGGTTGAGAAGGATGAAGTTTCGGTTTTGTTATCGATTAAGAGGGGTCTTGTTGATCCTTTGAACCAGTTGGGAGACTGGAAAGTGGAGGAAAATGGGGTTGGGAATGGTTCAGTTCACTGTAATTGGACTGGGGTGTGGTGCAACTCTAAAGGAGGTGTTGAGAGGCTTGATCTCTCTCACATGAATCTCAGTGGCCGGGTATTGGATGAGATTGAGCGCCTGCGTAGTCTCGCTCATTTGAACTTGTGCTGCAATGGGTTCTCTTCATCTTTGCCTAAAACCATGTCTAATCTTCTGGCATTGAGGAGCTTTGATGTCAGTCAGAATTTCTTTGAGGGTGGCTTTCCTGTGGGGTTTGGAAGGGCACCTGGATTGACGATTCTGAATGCTTCAAGCAATAATTTCTCGGGTTTTCTTCCTGAGGATCTTGGAAACCTGACTGCACTGGAGATTCTGGATCTCAGAGGGAGTTTCTTCCAAGGCTCAATTCCGAAATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGCCTTTCAGGGAATAATCTTACAGGCCAAATACCGAGGGAGATTGGGCAGCTTTCATCACTGGAGACTATCATTCTTGGGTACAATGAATTTGAAGGTGAAATCCCTGTGGAGCTTGGGAATCTCACCAATCTCAAGTATCTGGATTTGGCTGTTGGCAACCACGGCGGCAAGATTCCAGCTGCCTTGGGGAGGCTGAAGCTGCTGAACACAGTTTTCTTGTATAAAAACAATTTTGAAGGCGAGATTCCACCAGAAATTGGCAACATCACTTCACTGCAGTTGCTGGATCTCTCTGATAACCTGTTATCAGGAGAAATTCCAGCTGAGATTGCTAAATTGAAGAATTTACAGCTGTTGAATCTCATGTGCAACCAACTTTCAGGTTCAGTTCCTTCTGGGCTTGAATGGTTGCCTGAGTTGGAGGTGCTTGAGCTTTGGAACAACTCCTTGACAGGCCCTTTGCCCAATGATCTTGGTAAGAATTCACCATTGCAGTGGTTGGATGTATCCTCCAATTCATTCACTGGTGGGATCCCTCCAAGCTTGTGCAATGGAGGAAACCTGACTAAGCTCATTCTCTTCAACAATGGCTTCTCTGGTCCGATTCCAATTGGGCTATCAACATGTGCCTCATTGGTTCGAGTTAGAATGCATAATAATCTCATTTCTGGGACAGTCCCAGTTGGGTTTGGAAAACTTGAGAAGCTTCAGAGATTAGAGTTGGCGAATAATAGTCTCACTGGGCAAATTCCAGGTGATATTGCGTCTTCTACTTCCCTTTCCTTCATTGATCTCTCCCGGAACCGCCTCCAGTCGTCTCTGCCTTCCACCATTCTTTCCATTCCTCAGTTGCAGAACTTCATGGCCTCACATAATAACTTGGAAGGTGAAATCCCAGACCAGTTCCAGGATTCTCCTTCACTTTCTGTGCTTGACCTGTCATCAAATCAGCTCACTGGAAGCATACCAGCAAGCATTGCTTCATGTGAGAAGATGGTCAATTTGAATCTCCAGAACAATCGGTTAACAGGGCAAATCCCAAAGACAGTTGCCACCATGCCTACATTAGCCATTCTTGATCTCTCCAACAATTCTCTAACCGGTACCATACCTGAAAACTTTGGAACTTCTCCAGCCTTAGAATCGCTTAATGTCTCATATAACAGGCTAGAGGGGCCTGTTCCAACGAACGGTGTGCTTCGAACAATAAATCCTGACGATCTCGTGGGCAATGCTGGTCTCTGTGGTGGTGTCCTCCCTCCATGCTCCTGGGGCGCAGAAACTGCGTCAAGACACAGAGGGGTTCATGCAAAGCACATTGTTGCTGGATGGGTCATTGGAATTTCCACAGTTTTAGCTGTTGGGGTTGCAGTTTTTGGTGCTCGGTCTCTGTACAAGAGGTGGTATTCAAATGGAAGCTGCTTCACAGAGAGATTTGAAGTGGGCAATGGAGAATGGCCATGGAGACTAATGGCATTCCAGAGACTAGGCTTCACAAGTGCTGACATTCTGGCTTGTATCAAGGAATCAAATGTGATTGGAATGGGAGCCACTGGGATTGTGTACAAAGCTGAGATGCCGAGGCTAAACACAGTTGTTGCAGTCAAGAAGCTATGGAGGTCAGAAACCGATATTGAAACTGGGAGCAGTGAAGATCTAGTGGGGGAAGTGAACCTCCTAGGGAGGCTAAGGCATCGAAACATTGTCCGGCTACTGGGTTTTCTTCATAATGATAGTGATGTGATGATAGTCTATGAGTTTATGCACAATGGCAGCCTAGGAGAAGCCTTACATGGAAAACAAGGAGGGAGGCTGCTGGTAGACTGGGTTTCTCGATACAATATAGCAATTGGGGTAGCCCAAGGGCTCGCCTATCTCCACCATGACTGTCATCCACCTGTCATTCATCGCGACGTCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGAATTGCGGATTTCGGATTGGCGAGGATGATGGTCAGGAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATTGCTCCTGAATATGGATATACTTTGAAGGTTGATGAGAAGATCGACATCTACAGCTTTGGAGTGGTACTGCTGGAGCTTCTGACCGGAAAAAGGCCATTAGATGCTGAGTTTGGGGAATTAGTGGACATAGTAGAATGGGTTAGGTGGAAGATTAGGGACAACAGAGCCTTAGAAGAAGCTCTAGACCCCAATGTAGGAAACTGCAAATACGTTCAAGAAGAGATGCTTTTGGTCCTGAGGATAGCCCTTCTTTGCACTGCTAAGCTCCCCAAGGACAGGCCCTCCATGAGGGATGTGATAACAATGCTTGGGGAGGCAAAGCCAAGGAGGAAAAGCAGTAGCAACATCAATGGATATGACATTAACAAAGCGAGACCAGTGTTCAGCACCTCACCTGTAAATGGCCTTATGTAG 3069 0.4617 MVGKNKMQVQAFLVLFFFYCCIGCYGRGVEKDEVSVLLSIKRGLVDPLNQLGDWKVEENGVGNGSVHCNWTGVWCNSKGGVERLDLSHMNLSGRVLDEIERLRSLAHLNLCCNGFSSSLPKTMSNLLALRSFDVSQNFFEGGFPVGFGRAPGLTILNASSNNFSGFLPEDLGNLTALEILDLRGSFFQGSIPKSFKNLQKLKFLGLSGNNLTGQIPREIGQLSSLETIILGYNEFEGEIPVELGNLTNLKYLDLAVGNHGGKIPAALGRLKLLNTVFLYKNNFEGEIPPEIGNITSLQLLDLSDNLLSGEIPAEIAKLKNLQLLNLMCNQLSGSVPSGLEWLPELEVLELWNNSLTGPLPNDLGKNSPLQWLDVSSNSFTGGIPPSLCNGGNLTKLILFNNGFSGPIPIGLSTCASLVRVRMHNNLISGTVPVGFGKLEKLQRLELANNSLTGQIPGDIASSTSLSFIDLSRNRLQSSLPSTILSIPQLQNFMASHNNLEGEIPDQFQDSPSLSVLDLSSNQLTGSIPASIASCEKMVNLNLQNNRLTGQIPKTVATMPTLAILDLSNNSLTGTIPENFGTSPALESLNVSYNRLEGPVPTNGVLRTINPDDLVGNAGLCGGVLPPCSWGAETASRHRGVHAKHIVAGWVIGISTVLAVGVAVFGARSLYKRWYSNGSCFTERFEVGNGEWPWRLMAFQRLGFTSADILACIKESNVIGMGATGIVYKAEMPRLNTVVAVKKLWRSETDIETGSSEDLVGEVNLLGRLRHRNIVRLLGFLHNDSDVMIVYEFMHNGSLGEALHGKQGGRLLVDWVSRYNIAIGVAQGLAYLHHDCHPPVIHRDVKSNNILLDANLEARIADFGLARMMVRKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKRPLDAEFGELVDIVEWVRWKIRDNRALEEALDPNVGNCKYVQEEMLLVLRIALLCTAKLPKDRPSMRDVITMLGEAKPRRKSSSNINGYDINKARPVFSTSPVNGLM* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0725 1022 Gene3D Ribonuclease Inhibitor 149 261 IPR032675 -
Vvi7g0725 1022 PANTHER UNNAMED PRODUCT 176 921 - -
Vvi7g0725 1022 Gene3D Transferase(Phosphotransferase) domain 1 797 1011 - -
Vvi7g0725 1022 SMART LRR_typ_2 511 534 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 342 366 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 438 462 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 294 318 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 102 126 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 463 486 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 558 582 IPR003591 -
Vvi7g0725 1022 SMART LRR_typ_2 198 222 IPR003591 -
Vvi7g0725 1022 SUPERFAMILY Protein kinase-like (PK-like) 711 988 IPR011009 -
Vvi7g0725 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 30 185 - -
Vvi7g0725 1022 FunFam MDIS1-interacting receptor like kinase 1 797 1005 - -
Vvi7g0725 1022 Pfam Protein kinase domain 714 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0725 1022 Gene3D Ribonuclease Inhibitor 32 148 IPR032675 -
Vvi7g0725 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 371 631 - -
Vvi7g0725 1022 Gene3D Ribonuclease Inhibitor 388 628 IPR032675 -
Vvi7g0725 1022 Pfam Leucine rich repeat 538 595 IPR001611 GO:0005515
Vvi7g0725 1022 Pfam Leucine rich repeat 417 475 IPR001611 GO:0005515
Vvi7g0725 1022 Pfam Leucine rich repeat 176 234 IPR001611 GO:0005515
Vvi7g0725 1022 ProSiteProfiles Protein kinase domain profile. 712 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0725 1022 ProSitePatterns Protein kinases ATP-binding region signature. 718 742 IPR017441 GO:0005524
Vvi7g0725 1022 SMART LRR_bac_2 582 602 - -
Vvi7g0725 1022 SMART LRR_bac_2 558 578 - -
Vvi7g0725 1022 SMART LRR_bac_2 462 482 - -
Vvi7g0725 1022 SMART LRR_bac_2 510 530 - -
Vvi7g0725 1022 SMART LRR_bac_2 150 170 - -
Vvi7g0725 1022 PRINTS Leucine-rich repeat signature 513 526 - -
Vvi7g0725 1022 PRINTS Leucine-rich repeat signature 558 571 - -
Vvi7g0725 1022 SMART serkin_6 712 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0725 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 186 286 - -
Vvi7g0725 1022 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Vvi7g0725 1022 FunFam Leucine-rich repeat receptor protein kinase EMS1 287 370 - -
Vvi7g0725 1022 FunFam MDIS1-interacting receptor like kinase 1 712 796 - -
Vvi7g0725 1022 SUPERFAMILY RNI-like 261 600 - -
Vvi7g0725 1022 SUPERFAMILY L domain-like 68 356 - -
Vvi7g0725 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Vvi7g0725 1022 Gene3D Ribonuclease Inhibitor 262 387 IPR032675 -
Vvi7g0725 1022 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Vvi7g0725 1022 Pfam Leucine Rich Repeat 513 534 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0725 Vvi-Chr7 7475850 7479012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0725 15 1022 Receptor kinase-like Gene Family AT1G08590 60.680 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi7g0725 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0725 - - vvi:109122934 2013.04