Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0724 ATGGATGGTGGTAGTGGAGGAGGAGTGTGTACAAGTGGGTCGATGTCCACTGTGTCCAAAGAGGACAACTTGATGGTGTCCACTGAGGTTTCTTCATACCCAGATGAAGCAGAGCTTGAGTTGGGTCTTGGATTGAGCCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTCAAGCCTCAAGAACAGGGGTGGGCTCAGTATGGAAGGATCTTGACTGCTAAGGACTTTCCTTCTACAGTTTCATCTTCATCTTCATCCTCTTCTTCACTGAGCAGAGCTAATAGAACAACAGTTGGTACCAAGAGAAGAGCTGATTCCGTGGCAGCTTCCAATAATGGCAGCAGTCAGGTTGTGGGATGGCCCCCTATCAGAGCTTATAGGATGAACAGCTTGGCTAACCAGTCAAAATCACTGGTCACTGAAGACTTGAATTCAATGGTTGAGAAAAGTAAAAGTACAAACACAATGGTAGAGAACACTTATAACGGAAGCAACAACACCAATGGTTATGCTAAGAAGAAAGGGCCCCTCAATACTTCGTTCTTTGTGAAAGTGAATATGGATGGAATTCCAATTGGAAGGAAGGTTGATCTGAGTGCTCATAGTTGCTACGAGACATTAGCAAAAACATTGGAGGAGATGTTTCAGGGACCAACCACAACTGTCAATGCAATAGGGTCTAGCAATGAGAATTATGATGCAATGACAGAATCAACAAGACCCTCAAAATTACTGGATGGTTCATCTGACTTTGTGCTCACCTATGAAGACAAGGAGGGAGACTGGATGCTGGTTGGAGATGTTCCTTGGGGGATGTTCCTGGGCTCTGCGAGGAGGCTCAGAATCATGAGGACATCTGATGCTAATGGACTTGCTCCAAGGATCCAAGAAAGAAATGGGAGACAAAGAAGCATGCGAATCTAA 924 0.4567 MDGGSGGGVCTSGSMSTVSKEDNLMVSTEVSSYPDEAELELGLGLSLGGGGGGGGGVKPQEQGWAQYGRILTAKDFPSTVSSSSSSSSSLSRANRTTVGTKRRADSVAASNNGSSQVVGWPPIRAYRMNSLANQSKSLVTEDLNSMVEKSKSTNTMVENTYNGSNNTNGYAKKKGPLNTSFFVKVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIGSSNENYDAMTESTRPSKLLDGSSDFVLTYEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAPRIQERNGRQRSMRI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0724 307 MobiDBLite consensus disorder prediction 76 115 - -
Vvi7g0724 307 MobiDBLite consensus disorder prediction 9 23 - -
Vvi7g0724 307 FunFam Auxin-responsive protein 175 295 - -
Vvi7g0724 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 38 289 IPR003311 GO:0005634|GO:0006355
Vvi7g0724 307 ProSiteProfiles PB1 domain profile. 180 287 IPR000270 GO:0005515
Vvi7g0724 307 SUPERFAMILY CAD & PB1 domains 176 283 - -
Vvi7g0724 307 Gene3D - 176 297 - -
Vvi7g0724 307 MobiDBLite consensus disorder prediction 1 23 - -
Vvi7g0724 307 Pfam AUX/IAA family 74 294 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0724 Vvi-Chr7 7467843 7474725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0724 184 294 B3 DNA Binding Superfamily AT1G59750 34.234 2.17e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Vvi7g0724 AUX_IAA 4.8e-65 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0724 K14484 - vvi:100244630 540.806