Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0719 ATGGCAGCGCTGCGAGGTCTCCTCTTCCTTGTCATGGCGTTAGCCTTTTGCTTCTTTTCAAAGACAGTAGTTGCAGCTACAGGGACTGCAACCTACTATACTCCTCCATACGTTCCTTCCTCTTGCAATGGTTATCAAAATGATGGTGTGATGATTGCGGCAGCGAGTGATGCAATCTGGGACAACCGCGGCGCTTGTGGAAGGAATTATAAGGTCAAATGCGAGGGTGCAACCAACGCTGGGGTCCCTCAACCTTGCCGGGGTGCTCAATCCGTGGTCGTGAAGATCGTCGACTACTGCCCACCTGGCTGTAGAGGCACCATCGACTTGTCTCAAGAAGCTTTTGCGTCCATTGCTGATCCAGATGCAGGGAAAATAAAAATATCCTTCCAACAGTATGAAGGGGAAGAGGCAGAGGCAGTTGCCAAACAGATGTGCCAAGAGGCAACGGTTTCCTTCAGCATGGTTTGCAACAAGATTAAGGGTCATAAGACAGAATTATCTAAAAGTGGGCAGCCCTATTCAGGGTCCATGTTGAGGCTTCTTAGATTGTTTCTAGCTGAGGTTATCATTGCATCCATGGTTTCTGGAAAGAATAACCAAGGGGTCATGGTTTTGAATGGATGGAGTGTTGTATTTATTCTGTCTTCCTACTCTTCCACTTGA 666 0.4775 MAALRGLLFLVMALAFCFFSKTVVAATGTATYYTPPYVPSSCNGYQNDGVMIAAASDAIWDNRGACGRNYKVKCEGATNAGVPQPCRGAQSVVVKIVDYCPPGCRGTIDLSQEAFASIADPDAGKIKISFQQYEGEEAEAVAKQMCQEATVSFSMVCNKIKGHKTELSKSGQPYSGSMLRLLRLFLAEVIIASMVSGKNNQGVMVLNGWSVVFILSSYSST* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0719 221 SUPERFAMILY Barwin-like endoglucanases 10 132 IPR036908 -
Vvi7g0719 221 FunFam Barwin-related endoglucanase 25 132 - -
Vvi7g0719 221 CDD DPBB_EG45-like 26 131 - -
Vvi7g0719 221 SMART dpbb_1 52 130 IPR007112 -
Vvi7g0719 221 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 132 IPR007112 -
Vvi7g0719 221 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 8 132 IPR044206 GO:0009627|GO:0048046
Vvi7g0719 221 Gene3D - 26 133 IPR036908 -
Vvi7g0719 221 Pfam Lytic transglycolase 53 129 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0719 Vvi-Chr7 7440529 7445059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0719 46 217 Expansin Gene Family AT3G29030 24.859 6.56e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0719 - - vvi:104879821 255.758