Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g0706 | ATGGCAAGGAATCCAAGAGTTTTGGCAGCCTATCGTGCAATGAGGGCCCTGGGCATTGCTGAGGCAACTGTGAAACCAGTCCTGAAGAATCTATTAAGATTATATGAGAAAAACTGGGAACTAATTGAAGAAGAGAATTATAGAGCCCTTGCTGATGCTATATTTGAGTATGAGGAAACTAAGGTGGATGAACAGAAGAAGCAATCTGAGATAGCTGATCAAGATAACATTTTGGGGGGAGAGACTCAGTTGCATGATGAGCCTGCTCGTCCCTTAAAAAGGTTGCGCTTAAGAAACCAAGAAAGTCAGGTTTCACCTTCTCTCGCAAATTCCAGCCAGACACTAGGTGGAGCTGTAATGAAAAGGCCTAAATTGGAGGATGCTGAACAACCTCAAACTCTTGCTGAAAGGCAACCACAGGGTATAGCAGAGACACCTGAGCCCAGTGTTGGAAACATAAGACCTGAACTGCATCCTGTTTCATCACCACAGGCACATCTTGTAAACAAAGGAAAGCAACCTGCTTTGCCCCAACCCTTGGCAGTGCAGGGAAGATCTGATTTATCTCCAACATCTGCTACAAAGAGGGCTGAATCTGATCTTCTTCATACTCAGCAACGCCTCAGAGACAAGGGAAAAGAGCCCCTGTCACCCCAAATTGCTGCAAAGGAGAAAAGATCAATTCCTGTCAGATCATTCCACCTGAATGCTGAGCCTGGCATTATTCTTTCGCCAAAACAGAAGGTGCATGATACTCCTGCCTTAATGAAGCCTAAAGATGAGCCATTTACTGATGACATACTGCAGCTTGAGGTTCCTATTGCTGTGATCCATCCAGATCCATTACATAAAGGAAATTTACCTGAAAATTATTCTACCGGAAAACTAGATGGCCCACAACCCCCTGTAAACAGTCGTGTAGATGGAGAAGATGAAGTTAATGGTGGTCCAGCTTCGTCAAGCGGAGCAGGGACCAATTGTGAGCTTGCAAACATCTCAAATCTAGAGATTGCTTCCTCTCCCTTGGGAGAGGTGAAGATTTCGCTGAGTTGCAACTCTGCTCTTGGAAAACCTGATTTCCGTATGCCAAGTCTTGATACACTTTTAAAGTTGGTAGAAGATAAATGTCTAAGATCGTATAAAATTATTGATCCAAATTTTTCTGTGACGAAACTGATGAGAGATATGTGCGACTGCTTTTTGGAACTAGGAACTCACACTGAAGAATCACATGAAGGATCAATAAATACGACACCAACTGGTGATTTGTTGGGAAAATCTACTGCACCAGATGCTGTAGGTTCCTGTGGGGATGAGGAAAATTTTAGCATGTCATCTTGTATAACGAATGGATCATTCAAGATTCAATGCTCAACTGAGGTGGCTGTGCCTCAGATTCCAAGATTACTTTCATCATCTTTGAATGGCCTGGGTGATCACATACAGCTCGATAGCAAAATTACTGAGAACAGTTGTAGAGAAAATGGCCAGGAAAAGGAAACAAATGGTCCCAATAATGCAAATTCACTTAGTCTGGTGGTGGTTCAACAGCGTCAATTAACTCCTGATGATATAAGGTTTATCCATGATGTTGATGACATAACAAAAGGAGAAGAAAAGGTCAGAATTCCATTGGTTAATGAAACCAACAGTGAGTTCCCAACACCCTTTCACTACATATCCCAAAACCTAGTTTTTCAAAATGCCTACATGAATTTGTCTCTTGCTCGGATTGGGATTGAAAATTGTTGTTCAACTTGTTTTGGTGATTGTCTATCTTCTTCAACACCTTGTGCCTGTGCATGTGAAAGTGGGGGTGATTTTGCATATACATTAGAAGGACTAGTTAAGGAAGACTTTTTAGAAGAGTGCATTTCAAGGAATCGTGACCCTCAACAGCACCAGCTTGCTTTTTGTCAAGAATGCCCTCTTGAAAGATCCAAGGCTGAAGATATTTTAGAACCATGCAAGGGTCACATTGTGAGGAAATTCATCAAAGAGTGTTGGAGCAAATGTGGCTGCTCCAAACAGTGCAGAAATCGTCTGGTGCAGAGAGGCATAACTTGCAATTTTCAGGTGTTTTTGACTCCTGATGGAAAAGGGTGGGGTCTTCGGACCCTAGAGGATTTACCAAAAGGTTCTTTTGTGTGTGAGTATGTTGGGGAAATATTGACTACAGTGGAGCTGTATGAACGAAACATGCAAAGTACCAGCAGAGGCAAACAAACATACCCAGTGCTCTTAGATGCTGATTGGGCTTTGAGAGGAATCTTGAAGGATGAAGAAGCTCTCTGTCTAGATGCAACATTTTATGGAAATGTTGCAAGGTTTATCAATCACAGGTGTTTAGATGCAAACTTAGTTGAGATACCAGTTGAAGTGGAATCCCCAGATCATCACTACTATCATCTTGCACTTTTCACAACAAGAAAAGTAAATGCTTTGGAAGAGCTGACTTGGGATTATGGCATTGACTTTGATGACCAGGATCATCCAGTTAAGACATTCAGATGCTGTTGTGGTAGCAAGTTCTGCCGTAATATGAAGCGCACAAGGTCTAGGTCTGCATTAAGTTTGGGATGA | 2583 | 0.422 | MARNPRVLAAYRAMRALGIAEATVKPVLKNLLRLYEKNWELIEEENYRALADAIFEYEETKVDEQKKQSEIADQDNILGGETQLHDEPARPLKRLRLRNQESQVSPSLANSSQTLGGAVMKRPKLEDAEQPQTLAERQPQGIAETPEPSVGNIRPELHPVSSPQAHLVNKGKQPALPQPLAVQGRSDLSPTSATKRAESDLLHTQQRLRDKGKEPLSPQIAAKEKRSIPVRSFHLNAEPGIILSPKQKVHDTPALMKPKDEPFTDDILQLEVPIAVIHPDPLHKGNLPENYSTGKLDGPQPPVNSRVDGEDEVNGGPASSSGAGTNCELANISNLEIASSPLGEVKISLSCNSALGKPDFRMPSLDTLLKLVEDKCLRSYKIIDPNFSVTKLMRDMCDCFLELGTHTEESHEGSINTTPTGDLLGKSTAPDAVGSCGDEENFSMSSCITNGSFKIQCSTEVAVPQIPRLLSSSLNGLGDHIQLDSKITENSCRENGQEKETNGPNNANSLSLVVVQQRQLTPDDIRFIHDVDDITKGEEKVRIPLVNETNSEFPTPFHYISQNLVFQNAYMNLSLARIGIENCCSTCFGDCLSSSTPCACACESGGDFAYTLEGLVKEDFLEECISRNRDPQQHQLAFCQECPLERSKAEDILEPCKGHIVRKFIKECWSKCGCSKQCRNRLVQRGITCNFQVFLTPDGKGWGLRTLEDLPKGSFVCEYVGEILTTVELYERNMQSTSRGKQTYPVLLDADWALRGILKDEEALCLDATFYGNVARFINHRCLDANLVEIPVEVESPDHHYYHLALFTTRKVNALEELTWDYGIDFDDQDHPVKTFRCCCGSKFCRNMKRTRSRSALSLG* | 861 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 65 | 91 | - | - | |
Vvi7g0706 | 860 | ProSiteProfiles | SET domain profile. | 689 | 823 | IPR001214 | GO:0005515 | |
Vvi7g0706 | 860 | ProSiteProfiles | Pre-SET domain profile. | 590 | 686 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Vvi7g0706 | 860 | Gene3D | SET domain | 534 | 848 | IPR046341 | - | |
Vvi7g0706 | 860 | Pfam | Pre-SET motif | 534 | 681 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Vvi7g0706 | 860 | PANTHER | INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED | 6 | 854 | - | - | |
Vvi7g0706 | 860 | CDD | SET_SETDB-like | 556 | 823 | - | - | |
Vvi7g0706 | 860 | SMART | set_7 | 689 | 829 | IPR001214 | GO:0005515 | |
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 184 | 199 | - | - | |
Vvi7g0706 | 860 | Pfam | Ubiquitin-binding WIYLD domain | 5 | 59 | IPR018848 | - | |
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 283 | 325 | - | - | |
Vvi7g0706 | 860 | Pfam | SET domain | 701 | 823 | IPR001214 | GO:0005515 | |
Vvi7g0706 | 860 | SUPERFAMILY | SET domain | 541 | 846 | IPR046341 | - | |
Vvi7g0706 | 860 | Gene3D | - | 1 | 60 | IPR043017 | - | |
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 98 | 116 | - | - | |
Vvi7g0706 | 860 | SMART | preset_2 | 531 | 673 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Vvi7g0706 | 860 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 855 | IPR025776 | - | |
Vvi7g0706 | 860 | FunFam | SET-domain containing protein lysine methyltransferase family protein | 534 | 848 | - | - | |
Vvi7g0706 | 860 | MobiDBLite | consensus disorder prediction | 122 | 204 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g0706 | Vvi-Chr7 | 7299440 | 7313963 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g0706 | 665 | 848 | C2H2 Transcription Factor Family | AT2G23740 | 39.683 | 3.40e-29 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Vvi7g0706 | Pre-SET | 1.1e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g0706 | - | - | vvi:100243013 | 1753.8 |