Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0699 ATGAGGAGCATGGCTATAATCCCAAGCACTTGTATTGTTGTTATTCAGTTTGTCTTCCTCATCTCCTTACTTTCTTTCAAGGTTACATCCTCATCCAGAACAGAGGCAGAAGCTCTCATCCAGTGGAAGAACAGCTTGTCTTCTTCCCCCTCTCTCAATTCATCGTGGGCTCTCACCAACATTGAAAACCTTTGCAGCTGGACGGGCGTTGTGTGCGGCACCACCGGAACTGTCTCCGAGATCAACCTCTCCCAGGCCAACCTCAAAGGAACGCTTGCCCAGTTTGATTTTGGTTCGTTTACTAATCTCACCCGCTTCAATCTCAGCATCAACAACCTCAACGGGTTGATACCATCCACAGTTGCCAACCTATCCAAGCTCACTTTCTTGGATTTAAGCAACAACCTTTTTGAGGGCAACATCCCTTGGGAGATTGGACAGCTGAAGGAGCTTCAGTATCTTAGCTTTTACAACAACTGTCTCAATGGCACCATCCCCTACCAAATTACCAATCTTCAAAAGATATGGTACTTACACCTTGGATGGAACTACCTGAAGTCTCCGGACTGGTCCAAGTTTTCGACCATGCCTCTGTTGACACACCTAGACTTCAACTTCAATGAACTTGCATCAGTTTTCCCGGAGTTCATAACTGACTGCCGGAACCTGACATACCTCGACTTGTCGTGGAATCACTTGACTGGTCCGATACCAGAGTCACTATTTCGCAATTCAGGGAAACTTGAATTCCTCAATCTTGCTAAGAATTTATTTGAAGGCAAGATTTCTTCTTCCATAGGTCAACTCAGAAACCTTCAGAAACTCGATCTCCATGGCAATGGCCTCAATTCTACAATTCCGGGGGAGCTTGGGCATTGTTCTAACATCATCTTCTTGGCTCTAGCTGAGAACTTACTTGCTGGAGTGCTGCCTTTGTCCTTGACCAATCTTAACAAGATATCAGAGTTGGGCTTGTCTGGAAATTCATTATCTGGTGAGATCTCCCCATATTTCTTCACCAATTGGACTGAATTGCTCTCTTTGCAACTTCAGCACAATCACTTCTTTGGAAAAATTCCATCTGAAATTGGCCTTTTGAAAAAGCTGAATGTCCTTTTCCTTTATAATAATAAGCTCAATGGCTCAATCCCCTCGGAGACTGGGAACTTGAGAGAGTTGTCTTCCTTAGACCTTTCGGGAAACCAACTCTCAGGTCCAATTCCTCCAACAATTTGCAAGCTCACCAAGCTTAATCTCTTACAGCTTTTCTACAACAATCTTAGTGGAACAATTCCTCCAGAGATTGGTAATATGAGCTCGCTGGTTATCCTCGATCTCAACACCAACAATTTGGAAGGAGAGCTACCAGAGACCATGTCACTCCTCAATAATCTAGAGATACTCTCTCTATTCACCAATAATTTCTCGGGCACTGTTCCAAGGGAACTGGGGAAAAACAACCTCAACTTGAAGAATGTAAGCTTTTCTGACAACAGCTTCACAGGAGAACTGCCGCCTGGACTATGTAATAGTTTCACTCTTCAACTGTTAACAGTAAACGGCAACAGCTTTACTGGGAAATTACCAGATTGCTTGAGGAATTGCTCGAGCCTAGATCGTGTCCGTCTTGAAGGGAACCACTTCAGTGGGGACATTTCCAAGGCATTTGGAGTCCATCCAAATCTCAGTTTTATTTCTCTGAGCGGCAACCAATTTTCAGGCGAGCTGTCACCTGAGTGGGGAGAATGCCAAGGCCTCACTAAATTACAGATGGATGGAAATAAAATCTCTGGTAAAATCCCATCTGAGCTTGGGAAGTTGTCTCAATTGCAGGTCCTAAGTCTGGATTCCAATGAATTTACTGGGGAAATTCCAATGGAACTGACGAAACTAAGCCTGTTGTTCAACCTCAGCTTGCGCAAAAACTTTTTCACAGGAAAGATCCCTCAGACTATAGGCACTTTATCTAATCTCCAGTATCTCAATTTAGCGGAAAATAAACTCAGTGGAAGCATACCAAAAGAGCTTGGGAATTGTGAGCACTTGGACAGCTTGGACTTAAGCCACAACGCTTTGTCAGGTGAAATACCATCAGAACTCGGAAACTTGGTCAATTTGCGGTATCTTTTGGACCTCAGCAGCAATTCACTGTCAAGAACAATCCCTTCAAACCTGGGAAAGCTTGTGAGATTGGAGAGCCTCAATCTCTCTCGAAACAATCTTATGGGGAAAATCCCATCATCATTTTCAAGCATGCTCAGTCTAAATTCCATTGATTTCTCATACAATCAGTTGACTGGTCAGATTCCAAGTAGCAATATTTTCAAGAAGGCAGCCTATACTGGAAACTCAGGTTTGTGTGGATATGCAGAAGGATTGAATCCTTGTTATTCAACTTCCCCCAGCAGCAAGCCCTCCAAGTTGAACAAAAAGGTTCTTATTGGTGTCCTTGTTCCTACTTGTGGGCTCTTGTTTTTGGCATTCATTGTTGCTGTAATTGTAATCCTCCATCCACGATCCAAACACTCTGATGAAGAGACTGAAAGTACAGAAAAGTATGATGCTGAGGAGTGGTTAATTTGGAAAAGACGAGGAATATTCACATTTGAGGATATTGTGAAGGCCACCGAAGACTTCAGTGAGAAGAACTGCATCGGAAAGGGAGGATTCGGGAGAGTTTACAAAGCTGTGTTGCCACAGGGTCAGACAGTTGCAGTTAAAAGACTTAATATGTCAGACTCAAGCAACATTCCAACAACAAATCGGCTGAGTTTTAAGAATGAGATCGAAATCCTGACAGAAGTTAAGCACCGAAATATCATTAAGCTTTTTGGGTTCTGTTCCAGGAAGGGGTCCATGTACTTGGTTTATAAATATATAGAGAGAGGCAGTTTGGGGAAAGTGTTGTATGGGGAAGCGGGGGAGATGGAGCTAAGCTGGGCCACAAGGGTTAAGATTGTGCAAGGCGTGGCTCATGCAATTGCTTACTTGCACCATGACTGCTCTCCGCCCATTGTCCACCGTGATGTAACTCTGAATAACATTTTGCTTGACTCGGAGTTTGAGCCACGGCTCTCAGACTTTGGAACTGCAAGATTGTTGTACCCGGACTCATCCAACTGGACTGCAGCAGCTGGGTCTTTTGGCTACATGGCTCCAGAGCTTGCGTTTACAATGTGCATCACAGATAAATGTGATGTCTACAGCTTTGGAGTGGTGGCACTGGAAGTAATGATGGGGAGGCATCCAGAGGAGCTCCTAGTTTCACTACCATCATCAGCACTATCTGATGATCCTGGTTTACTTCTGAAGGATGTGCTAGATCAGAGACTTCCAATGCCCACAGGGCAATTAGCAGAAGAAGTAGTGTTTGTAGTCAAGGTAGCCTTAGCATGCACGCATGCGGCTCCAGAGTCACGACCCACCATGCGTTTTGTGGCAAAAGAACTATCAGCTCAACCCAGGCTCCCCCATTCAGAGCCTTTCCCCAGGTAA 3495 0.4443 MRSMAIIPSTCIVVIQFVFLISLLSFKVTSSSRTEAEALIQWKNSLSSSPSLNSSWALTNIENLCSWTGVVCGTTGTVSEINLSQANLKGTLAQFDFGSFTNLTRFNLSINNLNGLIPSTVANLSKLTFLDLSNNLFEGNIPWEIGQLKELQYLSFYNNCLNGTIPYQITNLQKIWYLHLGWNYLKSPDWSKFSTMPLLTHLDFNFNELASVFPEFITDCRNLTYLDLSWNHLTGPIPESLFRNSGKLEFLNLAKNLFEGKISSSIGQLRNLQKLDLHGNGLNSTIPGELGHCSNIIFLALAENLLAGVLPLSLTNLNKISELGLSGNSLSGEISPYFFTNWTELLSLQLQHNHFFGKIPSEIGLLKKLNVLFLYNNKLNGSIPSETGNLRELSSLDLSGNQLSGPIPPTICKLTKLNLLQLFYNNLSGTIPPEIGNMSSLVILDLNTNNLEGELPETMSLLNNLEILSLFTNNFSGTVPRELGKNNLNLKNVSFSDNSFTGELPPGLCNSFTLQLLTVNGNSFTGKLPDCLRNCSSLDRVRLEGNHFSGDISKAFGVHPNLSFISLSGNQFSGELSPEWGECQGLTKLQMDGNKISGKIPSELGKLSQLQVLSLDSNEFTGEIPMELTKLSLLFNLSLRKNFFTGKIPQTIGTLSNLQYLNLAENKLSGSIPKELGNCEHLDSLDLSHNALSGEIPSELGNLVNLRYLLDLSSNSLSRTIPSNLGKLVRLESLNLSRNNLMGKIPSSFSSMLSLNSIDFSYNQLTGQIPSSNIFKKAAYTGNSGLCGYAEGLNPCYSTSPSSKPSKLNKKVLIGVLVPTCGLLFLAFIVAVIVILHPRSKHSDEETESTEKYDAEEWLIWKRRGIFTFEDIVKATEDFSEKNCIGKGGFGRVYKAVLPQGQTVAVKRLNMSDSSNIPTTNRLSFKNEIEILTEVKHRNIIKLFGFCSRKGSMYLVYKYIERGSLGKVLYGEAGEMELSWATRVKIVQGVAHAIAYLHHDCSPPIVHRDVTLNNILLDSEFEPRLSDFGTARLLYPDSSNWTAAAGSFGYMAPELAFTMCITDKCDVYSFGVVALEVMMGRHPEELLVSLPSSALSDDPGLLLKDVLDQRLPMPTGQLAEEVVFVVKVALACTHAAPESRPTMRFVAKELSAQPRLPHSEPFPR* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0699 1164 PRINTS Leucine-rich repeat signature 728 741 - -
Vvi7g0699 1164 PRINTS Leucine-rich repeat signature 393 406 - -
Vvi7g0699 1164 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1005 1017 IPR008266 GO:0004672|GO:0006468
Vvi7g0699 1164 Gene3D Transferase(Phosphotransferase) domain 1 960 1157 - -
Vvi7g0699 1164 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Vvi7g0699 1164 FunFam Leucine Rich Repeat family protein, expressed 191 286 - -
Vvi7g0699 1164 FunFam Leucine-rich repeat receptor protein kinase MSP1 842 959 - -
Vvi7g0699 1164 SMART LRR_typ_2 728 751 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 655 679 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 438 462 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 196 219 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 703 727 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 366 389 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 607 631 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 317 341 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 390 414 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 124 148 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 100 123 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 269 293 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 752 777 IPR003591 -
Vvi7g0699 1164 SMART LRR_typ_2 220 244 IPR003591 -
Vvi7g0699 1164 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 487 800 - -
Vvi7g0699 1164 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Vvi7g0699 1164 Gene3D Ribonuclease Inhibitor 244 336 IPR032675 -
Vvi7g0699 1164 Gene3D Phosphorylase Kinase; domain 1 840 959 - -
Vvi7g0699 1164 FunFam MDIS1-interacting receptor like kinase 2 960 1155 - -
Vvi7g0699 1164 CDD STKc_IRAK 885 1150 - -
Vvi7g0699 1164 Pfam Leucine rich repeat 183 233 IPR001611 GO:0005515
Vvi7g0699 1164 Pfam Leucine rich repeat 636 692 IPR001611 GO:0005515
Vvi7g0699 1164 Gene3D Ribonuclease Inhibitor 488 804 IPR032675 -
Vvi7g0699 1164 SUPERFAMILY L domain-like 582 771 - -
Vvi7g0699 1164 SUPERFAMILY RNI-like 80 404 - -
Vvi7g0699 1164 SUPERFAMILY RNI-like 323 645 - -
Vvi7g0699 1164 SUPERFAMILY Protein kinase-like (PK-like) 860 1150 IPR011009 -
Vvi7g0699 1164 Pfam Protein kinase domain 880 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0699 1164 FunFam MDIS1-interacting receptor like kinase 2 318 486 - -
Vvi7g0699 1164 ProSitePatterns Protein kinases ATP-binding region signature. 885 907 IPR017441 GO:0005524
Vvi7g0699 1164 Gene3D Ribonuclease Inhibitor 192 243 IPR032675 -
Vvi7g0699 1164 Pfam Leucine Rich Repeat 393 414 IPR001611 GO:0005515
Vvi7g0699 1164 Pfam Leucine Rich Repeat 730 751 IPR001611 GO:0005515
Vvi7g0699 1164 FunFam MDIS1-interacting receptor like kinase 2 32 190 - -
Vvi7g0699 1164 ProSiteProfiles Protein kinase domain profile. 879 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0699 1164 Gene3D Ribonuclease Inhibitor 337 487 IPR032675 -
Vvi7g0699 1164 PANTHER LEUCINE RICH REPEAT KINASE 2 444 1153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0699 Vvi-Chr7 7199256 7202858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0699 15 601 Receptor kinase-like Gene Family AT4G08850 34.219 1.62e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi7g0699 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0699 - - vvi:100266867 2256.48