Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0698 ATGGAGAGAGGTAGTTTGAGAAATGTATTGTATGGGGAAGAAGGGGAGGTGGAGCTGGGCTGGGACACAAGGGTTAAAATTGTGCAAGGACTAGCTCATGCACTTGCTTACTTGCACCATGACTGCTATCCACCTATCGTGCACCGTGATGTGTCGCTGAGCAACATTTTGCTTGACTCAGGGTTTGAGCCGCGTCTCTCAGATTTTGGCACAGCAAGACTTTTGAGCCCAGGTTCACCTAACTGGACCCCAGTTGCAGGGACTTATGGCTACATGGCACCAGAGCTGGCCCTTACAATGCGAGTCACAGATAAAAGTGATGTCTATAGCTTTGGAGTGGTGGCATTGGAAGTAATGATGGGAAAGCATCCGGGGGAGCTCCTATTTTCACCAGCATTATCAGCATTATCTGATGATCCTGATTCGTTCATGAAGGATGTGCTAGACCAAAGGCTCCCACCTTCCACAGGACAAGTAGCAGAAGAAGTGCTGCTTGTAGTTTCAGTAGCCTTGGCATGCACACATGCCGCTCCTGAGTCACGACCCACCATGCGTTTCGTGGCAAAACAACTATCAGCTCGAGTCCCTGCTTCCCAGTCACACAGTAATCCTTAA 615 0.4943 MERGSLRNVLYGEEGEVELGWDTRVKIVQGLAHALAYLHHDCYPPIVHRDVSLSNILLDSGFEPRLSDFGTARLLSPGSPNWTPVAGTYGYMAPELALTMRVTDKSDVYSFGVVALEVMMGKHPGELLFSPALSALSDDPDSFMKDVLDQRLPPSTGQVAEEVLLVVSVALACTHAAPESRPTMRFVAKQLSARVPASQSHSNP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0698 204 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0698 204 FunFam MDIS1-interacting receptor like kinase 2 1 197 - -
Vvi7g0698 204 PANTHER LEUCINE RICH REPEAT KINASE 2 1 200 - -
Vvi7g0698 204 SUPERFAMILY Protein kinase-like (PK-like) 1 191 IPR011009 -
Vvi7g0698 204 ProSitePatterns Tyrosine protein kinases specific active-site signature. 46 58 IPR008266 GO:0004672|GO:0006468
Vvi7g0698 204 Pfam Protein kinase domain 2 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0698 204 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0698 Vvi-Chr7 7175304 7176037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0698 1 196 Receptor kinase-like Gene Family AT1G72180 42.927 1.79e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi7g0698 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0698 - - vvi:100246300 394.43