Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0696 ATGAATGTCAGTTTTGCCAACAACAGATTCTCAGGAGAATTGCCTCCTGGATTAAGTAATGGCTTTGCTTTTCAACATTTAACTGTAAATGAAGGCAACAACTTCACAGGACCGTTGCCAGAGTGCTTGATGAACTGCACAAGGCTATTTCGAGTCCGTCTTGAAGGGAACCAATTCACCGGAGACATTTCCAAGGCATTTGGAGTTCATCCAAGTCTCAATTTTATTTCTCTGAGTGGCAATCGATTTTCAGGTGAGCTTTCACCTGAGTGGGGGGAATGTCAAAGCCTCACCAGCTTGCAGGTGGATGGGAATAAAATTTCTGGAGAAATCCCAGCTGAGCTTGGGAAATTCCGATTGTTCAACCTCAGCTTGAGTAGAAATCATTTGACAGGAGACATCCCCCAGTTCACAGGCAATTTAACCAATCTTCAGTATCTGAATTTAGCAGGAAACGAATTTCACAAAGATTTGTCAGGTGAAATACCGTCAGAGCTTGGAAACTTGTTCACCTTGCAGTACCTTTTGGATCTCAGTGGCAATTCGCTCTCTGGGACAATCCCTTCAAACCTGGGGAAGCTTGCCTCATTGGAGAACCTGAATCTCTCACATAACCATCTCACAGGGAGAATCCCATCTTCGTTATCAAACATGAAGAGTCTAAACTCCTTTGATTTCTCATACAATGAGCTGACATGTCCAATTCCAACTAGGGATGTTTCCAAGCAGGCAACTTACACTGGAAACTCAGGTTTGTGTGGGGTTGCAGAAGAATTAAGTCCTTGTTCTTCAAGTTCGCCAAGCAGCAAACCCTTGATTTGGGAAAGACTCAGAAAATTCAGATTTGGGGATATTGTCAAAGCCACTGAAGACTTCAGCGAAAATTACTGCATTGGAAAAGGAGGATTCCAGACTGTTTACAAAGTAGCATTGCCAATGGGTCAGATTAATGAAATCCTCACTCTGACAGAAGTTAAGCACAGGAATATCATTAAACTTCATGGGTTCCATTCCAGGAATGGATTCATGTACCTGGTCTGTAACTACTTAGAGAGAGGTAGTTTAGGGAAGGAACTATATGGGGAGGAAGGGAAAGTGGAGCTGGGGTGGGCCACTAGATTTAGCATTCTGCAGGGAGTGGCTCATGCACTTGCTTACTTGCATCATGACTGCTCTCCACCCATTGTCCACCACGACGTTACTCTGAACAACATCTTGCTGGAGTCAGATTTTGTGCCACGGCTCTCAGACTTTGACACAGCGAGATTGTGGGACCTGAATTCATCCAACTGGTCTACAGTTGCAGGGTCTTATGGCTACATTGCTCCAGAGCTTGCGCTTACAATGCGGGTCACTAACAAATGTGATGTGTATGGCTTTGGGGCGGTGGCATTGGAAGTGATGATGGGAAGGCACCCAGGGGAGCTCCTACTTTTACTGTCTTCTCCAGAAATATCTGATGGTCCTGGGTTGTTGTTGAAGGACATGCTAGATCAGAGGCTCCCTGCTCCCCAGGGTCAATTAGCAGAGAAAGTGGTGCGTGTGGTCACCATAGCCTTAGCATGCACGCGTGCCAATCCAGAGCCACGCCCCACCATGCGCTTTGTGGCACAAGAACTCTCTGCTCAAATCCAGGCTCGCCTATCTGAGCCATTCCACACCGTAACCATTGGCAAGCTAACAAGCCTTCAGAAGTAG 1698 0.4605 MNVSFANNRFSGELPPGLSNGFAFQHLTVNEGNNFTGPLPECLMNCTRLFRVRLEGNQFTGDISKAFGVHPSLNFISLSGNRFSGELSPEWGECQSLTSLQVDGNKISGEIPAELGKFRLFNLSLSRNHLTGDIPQFTGNLTNLQYLNLAGNEFHKDLSGEIPSELGNLFTLQYLLDLSGNSLSGTIPSNLGKLASLENLNLSHNHLTGRIPSSLSNMKSLNSFDFSYNELTCPIPTRDVSKQATYTGNSGLCGVAEELSPCSSSSPSSKPLIWERLRKFRFGDIVKATEDFSENYCIGKGGFQTVYKVALPMGQINEILTLTEVKHRNIIKLHGFHSRNGFMYLVCNYLERGSLGKELYGEEGKVELGWATRFSILQGVAHALAYLHHDCSPPIVHHDVTLNNILLESDFVPRLSDFDTARLWDLNSSNWSTVAGSYGYIAPELALTMRVTNKCDVYGFGAVALEVMMGRHPGELLLLLSSPEISDGPGLLLKDMLDQRLPAPQGQLAEKVVRVVTIALACTRANPEPRPTMRFVAQELSAQIQARLSEPFHTVTIGKLTSLQK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0696 565 FunFam Uncharacterized protein 263 314 - -
Vvi7g0696 565 Gene3D Phosphorylase Kinase; domain 1 263 314 - -
Vvi7g0696 565 Gene3D Transferase(Phosphotransferase) domain 1 354 554 - -
Vvi7g0696 565 FunFam MDIS1-interacting receptor like kinase 2 350 546 - -
Vvi7g0696 565 SUPERFAMILY RNI-like 4 232 - -
Vvi7g0696 565 ProSitePatterns Tyrosine protein kinases specific active-site signature. 395 407 IPR008266 GO:0004672|GO:0006468
Vvi7g0696 565 Gene3D Ribonuclease Inhibitor 1 262 IPR032675 -
Vvi7g0696 565 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Vvi7g0696 565 PANTHER LEUCINE RICH REPEAT KINASE 2 3 549 - -
Vvi7g0696 565 SUPERFAMILY Protein kinase-like (PK-like) 266 540 IPR011009 -
Vvi7g0696 565 Pfam Protein kinase domain 313 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0696 565 Pfam Leucine Rich repeats (2 copies) 122 154 IPR025875 -
Vvi7g0696 565 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 65 155 - -
Vvi7g0696 565 ProSiteProfiles Protein kinase domain profile. 271 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0696 565 Gene3D Phosphorylase Kinase; domain 1 315 353 - -
Vvi7g0696 565 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 156 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0696 Vvi-Chr7 7161893 7164031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0696 8 443 Receptor kinase-like Gene Family AT4G08850 38.230 2.27e-101 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi7g0696 Pkinase 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0696 - - vvi:100253178 806.594