Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0693 ATGGCAATGACTCATAGAGCTCCTCTTTTTCTGATTCCTATCCTCTTCCTTGTTTTACTTCCTTTGAAAGTCACATCATCATCCACAACAGAAGCTGAAGCTCTTATCAAATGGAAGAACAGCTTAATTTCTTCTTCTCTTCTCAATTCATCATGGTCCCTCACCAACACTGGGAACCTCTGCAACTGGACAGGTATTGCTTGTGATACCACCGGAAGCGTCACTGTGATAAATCTCTCAGAGACAGAGCTGGAAGGAACGCTTGCCCAGTTTGATTTCGGTTCATTCCCTAATCTCACTGGCTTCAATCTCAGCAGCAATTCCAAACTCAATGGATCCATACCTTCTACGATTTACAACCTCTCTAAGCTCACTTTCTTGGACTTGAGCCACAACTTTTTTGATGGCAACATCACTTCAGAGATTGGAGGGTTGACAGAGCTTCTGTATCTCAGCTTTTACGACAACTATCTCGTTGGTACCATCCCCTACCAGATTACCAATCTTCAGAAGATGTGGTACTTGGATCTTGGATCCAACTACTTACAATCTCCAGACTGGTCTAAGTTTTCGAGCATGCCTCTGCTGACACGCCTGAGCTTCAACTACAATACACTTGCATCGGAATTCCCGGGGTTCATAACTGATTGCTGGAACTTGACATACCTCGACTTGGCACAGAATCAACTGACTGGCGCAATACCAGAGTCGGTATTTAGCAATCTGGGCAAGCTTGAATTCCTCAATCTCACTGACAATTCATTCCGGGGGCCATTGTCATCCAACATTTCCAGGCTTTCCAAGCTCCAAAACCTTCGCCTAGGAAGAAACCAATTCAGTGGTTCAATTCCTGAAGAAATCGGTACGCTCTCTGATCTTGAAATATTAGAAATGTACAACAATTCATTTGAAGGGCAGATTCCTTCTTCTATAGGTCAGCTCAGAAAGCTTCAGATACTCGATATCCAAAGAAATGCCCTGAATTCTACAATTCCATCTGAGCTTGGCTCTTGTACTAATCTCACCTTCTTATCTCTAGCTGTGAACTCACTATCCGGGGTGATTCCTTCTTCCTTCACCAATCTTAACAAGATATCCGAGTTGGGTTTGTCGGACAATTTTTTATCTGGTGAGATCTCACCTTATTTCATCACTAATTGGACTGGACTGATCTCTTTGCAAGTTCAGAACAATAGCTTCACTGGAAAAATCCCATCTGAGATTGGCCTTTTGGAAAAGCTGAATTACCTTTTCCTGTATAATAATATGCTGTCCGGGGCAATCCCATCAGAGATTGGGAATTTGAAAGACTTGCTTCAACTAGACCTTTCACAAAATCAGCTTTCGGGTCCAATCCCTGTAGTAGAGTGGAATCTCACACAGCTTACTACCTTACATCTTTATGAAAACAATCTCACTGGAACAATTCCTCCAGAGATTGGTAACTTGACATCATTGACTGTTCTTGATCTCAACACTAACAAATTGCATGGAGAGCTGCCAGAGACATTGTCACTCCTCAATAATCTAGAGAGACTCTCCGTGTTCACCAACAATTTCTCAGGCACCATTCCGACTGAACTTGGGAAGAACAACCTCAAGTTGACGCTTGTCAGTTTTGCCAACAACAGCTTCTCAGGAGAATTGCCTCCTGGATTATGTAATGGCTTTGCTCTTCAAAATTTAACGGTAAATGGAGGCAACAACTTCACAGGACCCTTGCCAGATTGCTTGAGGAACTGCACGGGGCTAACTCGAGTCCGTCTTGAAGGGAACCAATTCACTGGAGACATTTCCAAGGCATTTGGAGTTCATCCAAGTCTCGTTTTCCTTTCTCTGAGTGGCAATCGATTTTCTGGTGAGCTTTCACCTGAGTGGGGGGAATGTCAAAAGCTCACTAGCTTGCAGGTGGATGGGAATAAAATTTCTGGAGAAGTCCCAGCCGAGCTTGGGAAGTTGTCACACCTGGGGTTTCTGAGCCTGGATTCCAATGAATTGAGTGGGCAAATTCCAGTGGCACTGGCGAATTTAAGCCAATTGTTCAACCTCAGCTTGGGTAAAAATCATCTGACAGGAGACATCCCCCAGTTCATAGGCACTTTAACTAATCTCAATTATCTGAATTTAGCAGGAAACAATTTCAGTGGAAGCATACCAAAAGAGCTGGGGAATTGTGAGCGCTTGTTGAGCTTGAACTTGGGCAACAATGATTTGTCCGGTGAAATACCTTCAGAGCTTGGAAACTTGTTCTCCTTGCAGTACCTTTTGGATCTCAGTAGCAATTCGCTCTCTGGGACAATCCCTTCAGACCTGGGGAAGCTTGCCTCATTGGAGAACCTGAATGTCTCACATAATCATCTCACAGGGAGAATCCCATCATTATCAGGCATGGTCAGTCTAAACTCCTCTGATTTCTCATACAATGAACTGACAGGTTCAATCCCAACTGGCGATGTCTTCAAGCGGGCAATTTATACTGGAAACTCGGGTTTGTGTGGAGATGCAGAAGGATTAAGTCCTTGTTCTTCAAGTTCCCCAAGCAGCAAGTCAAACAAAAAAACCAAGATTCTAATTGCTGTCATTGTTCCAGTCTGTGGCCTCTTATTACTTGCAATTGTTATTGCTGCAATTCTTATACTTCGAGGGCGAACTCAACACCATGATGAAGAGATCAATAGTCTAGACAAGGATCAGAGTGGCACACCCTTGATTTGGGAAAGACTGGGAAAATTCACATTTGGGGATATTGTGAAAGCCACTGAAGACTTCAGCGATAAGTACTGTATTGGAAAAGGAGGATTTGGGACTGTTTACAAAGCGGTATTACCAGAGGGTCAGATTGTTGCGGTCAAAAGACTCAATATGTTAGACTCCAGCGACCTTCCAGCAACAAATAGGCAGAGTTTTGAGAGTGAAATTGTCACTCTGAGAGAAGTTCAGCATAGGAATATCATTAAACTTCATGGGTTCCATTCCAGGAATGGATTCATGTACTTAGTGTATAACTACATAGAGAGAGGTAGTTTGGGGAAAGTACTAGATGGGGAGGAAGGGAAAGTGGAGCTGGGGTGGGCCACAAGAGTTAGGATTGTGCGGGGAGTGGCTCATGCGCTTGCTTACTTGCATCATGACTGCTCTCCACCCATTGTCCACCGTGATGTTACTCTGAACAATATCTTGCTGGAGTCAGATTTTGAGCCACGGCTCTCAGACTTTGGCACAGCGAGATTGTTGGACCCGAATTCATCCAACTGGACTACAGTTGCAGGGTCTTATGGCTACATTGCCCCAGAGCTTGCACTTACAATGAGGGTCACGGACAAGTGCGATGTGTATAGCTTTGGGGTGGTGGCATTGGAAGTGATGCTGGGAAGGCACCCAGGGGAGCTCCTACTTTCATTGCCTTCTCCAGCAATATCTGATGATTCAGGGTTGTTCTTGAAGGACATGCTAGATCAGAGGCTCCCAGCTCCCACAGGCCGATTGGCAGAGGAAGTGGTGTTTGTGGTCACGATAGCCTTGGCATGCACGGGTGCCAATCCAGAGTCACGCCCCACCATGCGCTTCGTTGCACAAGAACTCTCTGCTCAAACCCAGGCTTGCCTATCTGAGCCATTCCACACTATAACCATGGGCAAGCTAACAAGCTTTCAGAAGTAG 3660 0.4484 MAMTHRAPLFLIPILFLVLLPLKVTSSSTTEAEALIKWKNSLISSSLLNSSWSLTNTGNLCNWTGIACDTTGSVTVINLSETELEGTLAQFDFGSFPNLTGFNLSSNSKLNGSIPSTIYNLSKLTFLDLSHNFFDGNITSEIGGLTELLYLSFYDNYLVGTIPYQITNLQKMWYLDLGSNYLQSPDWSKFSSMPLLTRLSFNYNTLASEFPGFITDCWNLTYLDLAQNQLTGAIPESVFSNLGKLEFLNLTDNSFRGPLSSNISRLSKLQNLRLGRNQFSGSIPEEIGTLSDLEILEMYNNSFEGQIPSSIGQLRKLQILDIQRNALNSTIPSELGSCTNLTFLSLAVNSLSGVIPSSFTNLNKISELGLSDNFLSGEISPYFITNWTGLISLQVQNNSFTGKIPSEIGLLEKLNYLFLYNNMLSGAIPSEIGNLKDLLQLDLSQNQLSGPIPVVEWNLTQLTTLHLYENNLTGTIPPEIGNLTSLTVLDLNTNKLHGELPETLSLLNNLERLSVFTNNFSGTIPTELGKNNLKLTLVSFANNSFSGELPPGLCNGFALQNLTVNGGNNFTGPLPDCLRNCTGLTRVRLEGNQFTGDISKAFGVHPSLVFLSLSGNRFSGELSPEWGECQKLTSLQVDGNKISGEVPAELGKLSHLGFLSLDSNELSGQIPVALANLSQLFNLSLGKNHLTGDIPQFIGTLTNLNYLNLAGNNFSGSIPKELGNCERLLSLNLGNNDLSGEIPSELGNLFSLQYLLDLSSNSLSGTIPSDLGKLASLENLNVSHNHLTGRIPSLSGMVSLNSSDFSYNELTGSIPTGDVFKRAIYTGNSGLCGDAEGLSPCSSSSPSSKSNKKTKILIAVIVPVCGLLLLAIVIAAILILRGRTQHHDEEINSLDKDQSGTPLIWERLGKFTFGDIVKATEDFSDKYCIGKGGFGTVYKAVLPEGQIVAVKRLNMLDSSDLPATNRQSFESEIVTLREVQHRNIIKLHGFHSRNGFMYLVYNYIERGSLGKVLDGEEGKVELGWATRVRIVRGVAHALAYLHHDCSPPIVHRDVTLNNILLESDFEPRLSDFGTARLLDPNSSNWTTVAGSYGYIAPELALTMRVTDKCDVYSFGVVALEVMLGRHPGELLLSLPSPAISDDSGLFLKDMLDQRLPAPTGRLAEEVVFVVTIALACTGANPESRPTMRFVAQELSAQTQACLSEPFHTITMGKLTSFQK* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0693 1219 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 534 845 IPR032675 -
Vvi7g0693 1219 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Vvi7g0693 1219 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 508 1196 - -
Vvi7g0693 1219 Gene3D Phosphorylase Kinase; domain 1 885 1003 - -
Vvi7g0693 1219 SUPERFAMILY L domain-like 659 816 - -
Vvi7g0693 1219 SUPERFAMILY RNI-like 305 682 - -
Vvi7g0693 1219 SUPERFAMILY RNI-like 77 383 - -
Vvi7g0693 1219 FunFam Leucine-rich repeat receptor protein kinase EMS1 382 460 - -
Vvi7g0693 1219 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 284 381 - -
Vvi7g0693 1219 ProSitePatterns Protein kinases ATP-binding region signature. 929 951 IPR017441 GO:0005524
Vvi7g0693 1219 FunFam Leucine-rich repeat receptor protein kinase MSP1 886 1003 - -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 456 533 IPR032675 -
Vvi7g0693 1219 FunFam Leucine Rich Repeat family protein, expressed 188 283 - -
Vvi7g0693 1219 ProSiteProfiles Protein kinase domain profile. 923 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0693 1219 Gene3D Transferase(Phosphotransferase) domain 1 1004 1206 - -
Vvi7g0693 1219 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1049 1061 IPR008266 GO:0004672|GO:0006468
Vvi7g0693 1219 SMART LRR_typ_2 459 482 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 314 338 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 701 725 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 774 797 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 219 241 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 653 677 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 411 435 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 483 507 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 121 145 IPR003591 -
Vvi7g0693 1219 SMART LRR_typ_2 266 290 IPR003591 -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 284 380 IPR032675 -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 381 455 IPR032675 -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 189 283 IPR032675 -
Vvi7g0693 1219 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Vvi7g0693 1219 SUPERFAMILY Protein kinase-like (PK-like) 903 1194 IPR011009 -
Vvi7g0693 1219 FunFam Leucine-rich repeat family protein 563 844 - -
Vvi7g0693 1219 Pfam Protein kinase domain 926 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0693 1219 FunFam MDIS1-interacting receptor like kinase 2 1004 1200 - -
Vvi7g0693 1219 ProSiteProfiles Leucine-rich repeat profile. 776 798 IPR001611 GO:0005515
Vvi7g0693 1219 FunFam MDIS1-interacting receptor like kinase 2 28 187 - -
Vvi7g0693 1219 PRINTS Leucine-rich repeat signature 483 496 - -
Vvi7g0693 1219 PRINTS Leucine-rich repeat signature 220 233 - -
Vvi7g0693 1219 FunFam Uncharacterized protein 461 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0693 Vvi-Chr7 7095873 7099623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0693 14 647 Receptor kinase-like Gene Family AT4G08850 33.837 8.59e-89 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi7g0693 Pkinase 8.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0693 - - vvi:100260006 2327.36