Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0663 ATGGAGCATGTAATCGGTGGGAAGTTCAAGATGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTATACATAGGTGTTAATGTACAAAGTGGGGAGGAAGTGGCCATCAAGGTGGAACCTACCAAAACTAAGCACCCTCAACTTCAATATGAATCAAAGTTGTACATGCTTCTCCAAGGAGGAACGGGAATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGCGAGTACAATGTCATGGTCATTGACCTTCTTGGACCGAGCTTGGAAGACCTGTTCAACTATTGCAATAGGAAGTTCACATTGAAGACAGTATTGATGCTTGCAGATCAATTAATTAACAGAGTTGAATACATGCATTCAAGAGGTTTTCTTCACCGTGATATAAAGCCCGACAACTTTTTAATGGGCCTAGGGCGCAGGGCAAATCAGGTGTATGCCATTGATTTTGGCCTTGCTAAAAAGTATAGGGATCTACAGACACATAAACACATTCCATACAGGGAAAATAAGAACCTCACAGGCACAGCTCGCTATGCAAGTGTTAACACCCATCTAGGAGTTGAGCAAAGCAGAAGGGATGATCTGGAATCTCTAGGCTACGTGCTTATGTATTTCCTAAGAGGAAGCCTTCCCTGGCAGGGGCTGAAAGCTGGCACCAAAAAGCAGAAATATGATAAGATCAGTGAAAAGAAGATGTTAACTCCCATAGAGGTACTTTGCAAATCATATCCGTCAGAGTTCACATCATACTTTCACTATTGCCGATCATTGCGATTTGAAGACAAGCCAGATTATTCATATCTGAAGAGGCTCTTCCGGGACTTATTCATTCGAGAAGGTTATCAATTTGACTATGTATTTGACTGGACTATATTGAAGTACCCTCAGATTGGTGCCAGCTCTAGAGGACGGCATTCCACTGGCAAAGCAGGTTTAAATGCTGGACCATCAGCTGAAAGACTGGATAGGACCTCAGGGCAAGAGATTCGGGATAGATTCTCTGGTGCAGTTGAAACATTCCCCCGAAGAAATGCTTTTGGTTCTGGTTTGCACAGTGACCATTCCAAAAACCGGACTTCAGATGGTGTACCCTCATCCAAGGATGTGCAAGCAGATTCAGAAAGAGGCCGCACTTCCCGAAATGGAAGCACTTCAAAAAGAGCTCTCATCTCAAGCAGCAGGCCAAGCTCCTCTGGAGAACCCAGTGAAGGACGGTCAAGCCGACTAGTGTCAAGCAGCAGCCGCATGTCCTCCTCCCATAGAATCCAACCAGGGTTTGAGTCCAAATCATCGTCATTTACACGCACTGCAGCAACAAAAGGCACACGAGATGACCCTCTGAGGAGCTTTGAGCTGCTCTCAATCAGGAAGTGA 1377 0.4546 MEHVIGGKFKMGRKIGSGSFGELYIGVNVQSGEEVAIKVEPTKTKHPQLQYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGASSRGRHSTGKAGLNAGPSAERLDRTSGQEIRDRFSGAVETFPRRNAFGSGLHSDHSKNRTSDGVPSSKDVQADSERGRTSRNGSTSKRALISSSRPSSSGEPSEGRSSRLVSSSSRMSSSHRIQPGFESKSSSFTRTAATKGTRDDPLRSFELLSIRK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0663 458 FunFam Putative Casein kinase I 1 85 - -
Vvi7g0663 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vvi7g0663 458 CDD STKc_CK1_delta_epsilon 8 282 - -
Vvi7g0663 458 PANTHER CASEIN KINASE-RELATED 9 403 - -
Vvi7g0663 458 MobiDBLite consensus disorder prediction 300 329 - -
Vvi7g0663 458 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0663 458 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vvi7g0663 458 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0663 458 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Vvi7g0663 458 MobiDBLite consensus disorder prediction 383 440 - -
Vvi7g0663 458 FunFam Casein kinase 1-like protein 1 330 - -
Vvi7g0663 458 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Vvi7g0663 458 MobiDBLite consensus disorder prediction 442 458 - -
Vvi7g0663 458 MobiDBLite consensus disorder prediction 345 458 - -
Vvi7g0663 458 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0663 Vvi-Chr7 6632088 6640189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0663 8 213 MAP Kinase Kinase Kinase AT3G06030 27.315 2.13e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vvi7g0663 Pkinase 1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0663 K08960 - vvi:100265228 885.174