Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0662 ATGAAGGGGGGATTTGAAGTTGTTCATGGGGCTCTTGATTTGATCCAGCCCCATGAACAATGGGAGTATAATATTATTGGGCTTCAGGGTGCAAGTTCCAGCAATTTTCCCAAGCCAATGGTGGTCGAAAACCGATCTAACTTGGAGAGGAACGAGCTGTCGGAGTGGGTGGAACATGTCACCAAGCAGCTTATAGAGGACCTGCCGGAGACTGTCGGTGAGGGCTTGAAGACCGAAGAGGTGACAATCGTGGGAGGGAGCTTTGCCCCGGTGCTTCAATGGGGGAATGAGGCAGCTGGAAGTCAAAGTAATAACTTGAGTACTGGAGATATCAATGGAGGATTGAGTAGGCCGGATGAACATGGCTTGGGCCTGATAACGCTTCTTCTGGAGTGTGCGGTGGCGATATCGGTTGATAATTTAGGGGAAGCGCATAGGATGCTGCTTGAGCTGACACAAATGGCTTCTCCTTATGGAGCATCATGTGCCGAGAGGGTTGTGTCCTATTTCGCCAAGGCCATGGCTAGTAGAGTCATTAACTCATGGTTAGGGCTTTGCTCGCCTCTAATCAGCCATAAGGCTGTCCATTCTTCACTTCAAATCTTTAACAACATCTCCCCTTTCATCAAGTTCGCACACTTCACCTCCAACCAATCCATTCTCGAGGCCTTCCATCGTCGGGACATGGTTCATATCATCGACCTCGACATCATGCAAGGCCTTCAATGGCCGGCCCTCTTCCACATCCTGGCCACCCGCATCGAGGGTCCTCCGCACATTAGAATGACCGGCATGGGCTCTTCCATCGAGCTCCTCACCCAGACAGGAAAGCAGCTCTCCAACTTCGCCAGGCGGCTTGGACTCTCATTCGAGTTCCACCCCGTCGCAAAGAAATTTGGAGAGATCAACGATATTACATCTCTGCAAATCCGGCGCGGAGAAACCCTAGCTGTGCACTGGCTGCAGCACTCCTTATACGATGCGACAGGACCCGATTGGAAGACGATAAGGCTACTGGAAGAGCTGGCTCCCAGAGTGATCACACTGGTTGAACAAGAAATATCCCATGGTGGGTCATTTTTAGACCGTTTTGTTGGTTCTCTTCACTACTACTCGACCATTTTCGATTCACTGGGGGCGTCATTTCCAAGCGACGATCCTGGTAGGCATCGGGTGGAGCATTGCCTTCTGTATAGGGAGATAAACAACATAATGGCAATAGGGGGGCCAGCGAGGAGCGGAGAGGACAAGTTTAGGCAATGGAGAAGTGAAATGGCAGCAAGGAATTGCTTTGTACAAGTGCCGATGAGCGGAAACGCCATGGCTCAAGCACAGCTGATACTGAACATGTTCCCTCCGGCTCATGGTTATAGCCTTGTACAGGGAGAAGGGACACTGAGGCTTGGATGGAAGGATACTGGCTTGTACAGTGCTTCTGCTTGGACTTCACAGGCTTATAGATAG 1464 0.5082 MKGGFEVVHGALDLIQPHEQWEYNIIGLQGASSSNFPKPMVVENRSNLERNELSEWVEHVTKQLIEDLPETVGEGLKTEEVTIVGGSFAPVLQWGNEAAGSQSNNLSTGDINGGLSRPDEHGLGLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGASCAERVVSYFAKAMASRVINSWLGLCSPLISHKAVHSSLQIFNNISPFIKFAHFTSNQSILEAFHRRDMVHIIDLDIMQGLQWPALFHILATRIEGPPHIRMTGMGSSIELLTQTGKQLSNFARRLGLSFEFHPVAKKFGEINDITSLQIRRGETLAVHWLQHSLYDATGPDWKTIRLLEELAPRVITLVEQEISHGGSFLDRFVGSLHYYSTIFDSLGASFPSDDPGRHRVEHCLLYREINNIMAIGGPARSGEDKFRQWRSEMAARNCFVQVPMSGNAMAQAQLILNMFPPAHGYSLVQGEGTLRLGWKDTGLYSASAWTSQAYR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0662 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 478 IPR005202 -
Vvi7g0662 487 Pfam GRAS domain family 125 482 IPR005202 -
Vvi7g0662 487 ProSiteProfiles GRAS family profile. 116 482 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0662 Vvi-Chr7 6614817 6616280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0662 119 485 GRAS Transcription Factor Family AT3G54220 56.383 4.06e-141 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi7g0662 GRAS 2.9e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0662 - - vvi:100263529 986.097