Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0661 ATGGATTCTGCAAGGAGTTGGTTTCAGAAGTTTCAACCGCGGGAGCGAGTGAGGCCTTCAGCTAGGAAGAAGGAAGGCACAGGTGCTGAAAAAGAAGAGACAGGTCCTACAGCAGGAGATGAAACACCTTCAAATGTCACAAAGCAGAAAGTTGCAGCTGCAAAGCAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAGTCTTCAGGAGAGGAGGGAACGGCGAAATATACTGGAAAAGAAGTTGGCTGATGCTGACGTCTCCGAGGAAGATCAGAATAACCTGCTAAAACACTTGGAGAAGAAGGAAACTGAATACATGCGCCTTCAAAGGCATAAGATGGGTGCTGATGATTTTGAATTATTGACGATGATCGGGAAGGGAGCATTTGGAGAGGTAAGAGTCTGTAGAGAGAAGACAACGGGTAATGTGTATGCAATGAAAAAGCTTAAGAAGTCAGAGATGCTTCGACGAGGCCAGGTGGAGCATGTTAAAGCTGAAAGGAATCTGCTTGCAGAGGTGGACAGCAATTGCATTGTTAAACTTTACTGTTCTTTCCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGAGGAGATATGATGACTTTACTCATGAGAAAGGATACCTTGACTGAAGATGAGGCTAGATTTTATGTTGGAGAAACAGTTTTGGCTATTGAATCTATTCACAAACATAATTACATTCATAGAGATATTAAACCCGATAACTTGCTACTTGATAAATATGGTCACTTAAGACTATCAGATTTTGGACTATGTAAGCCATTGGACTGCAGTACTCTTGAGGAGGATTTTACAATTGTTAACAGTCCTAATGGGGGTCATCAGGGTGATCCTGCAGCACCGAAGCGCACCCAACAAGAGCAACAACAGCATTGGCAGAAGAACAGGAGGATGCTTGCTTATTCTACTGTTGGGACACCAGACTATATCGCTCCAGAAGTTTTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGTGCTATCATGTATGAAATGCTTGTGGGGTATCCACCTTTTTATTCTGATGATCCCATGTCAACATGTAGGAAGATTGTAAATTGGAGAACTCATTTAAAGTTTCCTGAAGAAGCAAGTCTATCTTCCGAAGCAAAAGATCTTATCAGTAAACTTTTGTGTAATGTAAGCCAGAGGCTGGGATCTAAAGGCGCAGATGAAATAAAGGTACACCCATGGTTTGAAGGTACTGAATGGGATAGACTATATCTTATGGAAGCTGCATTTATTCCCGAGGTCAGAGATGAATTAGATACTCAGAATTTTGAAAAGTTCGAAGAGTCTGAGAGCCTAGGTCAATCATCATCAAAAAGTGGTCCTTGGAGAAAGATGCTTTCATCGAAGGACATGAACTTTGTGGGTTATACGTATAAGAACTTTGAAATCATCAATGATTATCAAGTTCCTGGAATGGCTGAATTGAAGAAAAAAACCAACAAACCGAAGAGAGCATCCATCAAGTCACTTTTTGAGGAAGAATCGGATGGATCTGATACAGTTGCTGATAATCAACCTGTTCAAGGGAGCTTTTTGAACCTCTTGCCTCCCCAACTAGAAGTGTCTCGAGATCAGAATGAATCATCATAA 1653 0.4108 MDSARSWFQKFQPRERVRPSARKKEGTGAEKEETGPTAGDETPSNVTKQKVAAAKQYIENHYKEQMKSLQERRERRNILEKKLADADVSEEDQNNLLKHLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGNVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEEDFTIVNSPNGGHQGDPAAPKRTQQEQQQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEASLSSEAKDLISKLLCNVSQRLGSKGADEIKVHPWFEGTEWDRLYLMEAAFIPEVRDELDTQNFEKFEESESLGQSSSKSGPWRKMLSSKDMNFVGYTYKNFEIINDYQVPGMAELKKKTNKPKRASIKSLFEEESDGSDTVADNQPVQGSFLNLLPPQLEVSRDQNESS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0661 550 MobiDBLite consensus disorder prediction 281 304 - -
Vvi7g0661 550 MobiDBLite consensus disorder prediction 9 37 - -
Vvi7g0661 550 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Vvi7g0661 550 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vvi7g0661 550 SUPERFAMILY Protein kinase-like (PK-like) 93 470 IPR011009 -
Vvi7g0661 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 468 - -
Vvi7g0661 550 Gene3D Phosphorylase Kinase; domain 1 91 203 - -
Vvi7g0661 550 Gene3D Transferase(Phosphotransferase) domain 1 313 434 - -
Vvi7g0661 550 MobiDBLite consensus disorder prediction 499 550 - -
Vvi7g0661 550 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vvi7g0661 550 CDD MobB_NDR_LATS-like 54 115 - -
Vvi7g0661 550 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Vvi7g0661 550 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Vvi7g0661 550 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Vvi7g0661 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Vvi7g0661 550 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vvi7g0661 550 Gene3D Transferase(Phosphotransferase) domain 1 204 275 - -
Vvi7g0661 550 ProSiteProfiles Protein kinase domain profile. 120 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0661 550 MobiDBLite consensus disorder prediction 1 47 - -
Vvi7g0661 550 Gene3D Phosphorylase Kinase; domain 1 435 449 - -
Vvi7g0661 550 SMART serkin_6 120 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0661 550 MobiDBLite consensus disorder prediction 499 516 - -
Vvi7g0661 550 Pfam Protein kinase domain 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0661 550 CDD STKc_NDR_like 118 480 - -
Vvi7g0661 550 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0661 Vvi-Chr7 6588813 6611750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0661 1 541 AGC Kinase Gene Family AT4G14350 77.206 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vvi7g0661 Pkinase 9.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0661 K08790 - vvi:100258384 1106.66