Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0646 ATGGTTTCTCTATCTACTTGGTGCCGCTACATTGCCCACAAGCTCGAATACTCCATTTCTATCAGTTGGAAGAGCTATAAAGGAGGTCAAATCAGTGACAGAGAAGTAGGTGATGTTGTTTGGAAAAATTTATTTCAGGGAAAGTTGACATACCTGCATTGGAATAAAGGAGGGGAGATGGCCCCCACTATAGGGGAGCAAGGAGGAACTCTTCTTGTCCGGAAATTGCCAGCTGCTGATCCAACGCGCGTTTTTGTTGGGGATGTTGTGGTCTTGAAAGACCCTGAAGAGTCAGATAATTATTTGGTTAGAAGATTGGCTGCAGTTGAAGGGTATGAAATGGGCTCTACTGATGAAAAAGATGAGCCTTTTGTTCTTGAAAAAGATCAGTGCTGGGTGTTGTCTGACAATGAAACTTTGAAGCCCACGCAAGCAAATGACAGTAGAATATTTGGCCCAGTCCCCATGTCGGATATAGTTGGTAGGGTCATATACTGCCTGAGAACAGCTGTGGATCATGGCCGTGTGCAGAACAGCCATTTCAGCATGCGAAAGGATACACCCGTGTTGGAAATTGAACTGGATGTTGATGAGATGGCAAGGCGTCACAAAACATAG 618 0.4482 MVSLSTWCRYIAHKLEYSISISWKSYKGGQISDREVGDVVWKNLFQGKLTYLHWNKGGEMAPTIGEQGGTLLVRKLPAADPTRVFVGDVVVLKDPEESDNYLVRRLAAVEGYEMGSTDEKDEPFVLEKDQCWVLSDNETLKPTQANDSRIFGPVPMSDIVGRVIYCLRTAVDHGRVQNSHFSMRKDTPVLEIELDVDEMARRHKT* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0646 205 Gene3D Umud Fragment, subunit A 49 184 - -
Vvi7g0646 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
Vvi7g0646 205 SUPERFAMILY LexA/Signal peptidase 56 168 IPR036286 -
Vvi7g0646 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0646 60 174 MADS-box Gene Family AT1G29960 29.268 1.24e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0646 - - vvi:100256678 422.935