Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0644 ATGCCGTCACTAATCTCCCAGGGCAAAATCCACCGCTTAGAGCTGGAAAACTTCAAGTCCTACAAGGGATTCCAGACCATCGGTCCATTCTATGACTTCACGGCGATTATTGGTCCAAACGGCGCGGGAAAGTCCAATCTCATGGACGCCATAAGCTTTGTTCTCGGTGTTCGTACGGGCCAGCTTCGCGGAGCACAATTGAAGGACTTGATCTACGCCTTTGACGACAAAGAGAAGGAACAAAAGGGTCGAAGGGCTTTTGTGAGGCTTGTGTACCAGCTGGGTAATGGGTCGGAGCTCCAATTCACACGGGCCATCACCAGTTCCGGCGGCAGTGAGTACCGAATCGATGGAAAAATGGTTTCGTGGGATGAGTATAATGGGAAACTGAAGTCGCTGGGGATTCTCGTCAAAGCGCGGAATTTTCTTGTTTTTCAGGTAAGGGCCTTCCCTCAAGTTGCTTCCCACCCAAAAAAACTCACTCTAGGCTGCACTGAGACTTTCCATATAGCCGACGAAGGGAAGGAGGCTGGATGGCCTGATACTAATGATTTGTAA 558 0.5 MPSLISQGKIHRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAFDDKEKEQKGRRAFVRLVYQLGNGSELQFTRAITSSGGSEYRIDGKMVSWDEYNGKLKSLGILVKARNFLVFQVRAFPQVASHPKKLTLGCTETFHIADEGKEAGWPDTNDL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0644 185 CDD ABC_SMC1_euk 10 146 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Vvi7g0644 185 Gene3D - 8 171 IPR027417 -
Vvi7g0644 185 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 9 148 - -
Vvi7g0644 185 Pfam RecF/RecN/SMC N terminal domain 10 136 IPR003395 -
Vvi7g0644 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 158 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0644 6 109 Structural Maintenance of Chromosomes family AT5G07660 36.036 1.09e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0644 K06636 - vvi:100263447 296.589