Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0608 ATGGATTCAGACTCAAGAGCTGCCCCTGAGGTGTGTGCATTTGGAGTGATCTGTAGGAGGTTCAAGCCACATCTTCTCATGGTTCTTGTTCACACCTGTTATACTATTCTCTATTTCACAGCAGAGGCTGCCTTTAACCATGGGTTGAATCCTCATGTTATGGTGACTTATCGACATTTCATTGGTGGTTTAGTGATGTTTCCTTTTGCCTATGTACTTGAAAGGAAAGTAAGGCCAAAGCTGACGCTAGCCTTGTTTGCAGAGATATTTGTGCTTTCTCTTTTTGGGATTGGCTTAACGCTTAACATGTACTTTGCAAGCTTGACATACACCTCACCAACCTTTCTAGCGTCGATGGTTAACACCATTGCATCCTTGACTTTTGTAATGGCAATTATTCTCAGACTGGAACATCTTGATATTAGAAACCCTAGAGGATTAGCCAAAATCCTTGGGACCTTATTTTCCTTGGTGGGGGTCATGATCATGACATCTTGCAAAGGACCTGTAATAAGAAACTTGAGCAGCCCTCTAATCCACATCGGAAGAAATAATATGCATGAGAACTGGACGAAAGGGTCGATTCTAACAGTAGCAAGTTGCATAACATGGTCTATTTGGTACATTATGCAGGCATTTACTATGAAGAGATATCCTGCACCACTGTCAATTACTACATGGATGAACTTTATCGGAGGAGCACAATCAGCTGTCATTGCAGTAATCATGCAACATAAACCAGAAGCATGGTCATTTTCAGTCAACATCCAATTGTGGTCCACCATTTATGCCGGAGTGGTGTGCTCGGGTATAATGATCTTCCTTTTACTATGGTGCACTAAACAAAAAGGGCCAGTTTTTGTGACCATGTTTAATCCCCTTTCAACAATAATGGTGGCATTTACAGCATACTTTGTTCTTGGCGAAAAGCTGTATACGGGCAGCATCGTGGGAGCAGTTATCGCTATTATTGGTTTATACTTGCTGTTGTGGGGCAAAGAGATTGATCAACAAGTTGGGGTGAAGTCCCAAGAGCAATCCAATTTAACTTCCGAGGAGCAGAAGGAACCAACCCAGATTGCCACTTCACCATAG 1095 0.4228 MDSDSRAAPEVCAFGVICRRFKPHLLMVLVHTCYTILYFTAEAAFNHGLNPHVMVTYRHFIGGLVMFPFAYVLERKVRPKLTLALFAEIFVLSLFGIGLTLNMYFASLTYTSPTFLASMVNTIASLTFVMAIILRLEHLDIRNPRGLAKILGTLFSLVGVMIMTSCKGPVIRNLSSPLIHIGRNNMHENWTKGSILTVASCITWSIWYIMQAFTMKRYPAPLSITTWMNFIGGAQSAVIAVIMQHKPEAWSFSVNIQLWSTIYAGVVCSGIMIFLLLWCTKQKGPVFVTMFNPLSTIMVAFTAYFVLGEKLYTGSIVGAVIAIIGLYLLLWGKEIDQQVGVKSQEQSNLTSEEQKEPTQIATSP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0608 364 MobiDBLite consensus disorder prediction 344 364 - -
Vvi7g0608 364 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Vvi7g0608 364 Pfam EamA-like transporter family 24 163 IPR000620 GO:0016020
Vvi7g0608 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 333 - -
Vvi7g0608 364 PANTHER WAT1-RELATED PROTEIN 23 343 IPR030184 GO:0016020|GO:0022857
Vvi7g0608 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0608 Vvi-Chr7 5910684 5913078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0608 19 356 Nodulin-like Gene Family AT2G39510 37.644 1.42e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0608 - - vvi:104879815 723.005