Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0606 ATGGCTACTGACTTGCAGCAAACGCTGAGAAGCCTCTGTTTCAATACTGAGTGGAAGTACGCCGTCTTTTGGAAACTCAAACATCGGGCTCGCATGGTGTTGACTTGGGAGGATGCTTACTATGACAACCATGACCAACATGATCCTTTGGAGGATAAGTGCTTCAGCAAGACACCAGACACCTTGCATGATGGGCACTATTCACATGATGCTCTTGGGTTGGCTGTGGCAAAGATGTCATATCATGTGTATTCTCTAGGGGAAGGGATTGTTGGACAGGTGGCAGTTACTGGAAAGCATCAGTGGATTTTTTCAGATAAGCATACAACTAATTCCTCTTCATCATTTGAGTACTGTGATGGGTGGCAAGCACAGTTTTCAGCTGGGATTAAGACCATTGTTGTTGTGGCTGTTGTTCCACATGGAGTTGTACAGCTTGGCTCTTTACAGCAACAGGTTGTTGAGGATTTGAAGCTGGTGTCTCGCATCAAAGATGTCTTCTTTGCACTTCAAGATTCTTCAGTGGCTTATATTCCTCATCCTATTCAATGTAGTATGAAGAGCTCTTTAGCTATGTCAGATATATCTACAAGAGGTTCTGCTTCAGATATAGTCCCTGATAGCCTATTCAATCTAGATAAAGGCATACACAAAGAAAGGCCAAATGTATGGTCTCCTATGTTCCCAATTTTTGGGAAACACAATGATAGTTCTTTCATTTTTCAGCTGCCTGCTATCCATCAGAACAGGGCAGTAAACATGTTCAATAAGGATGGAGGGCTTGAATTATCCTCATCGCAGAGTGATGAAAGCACCAAATTTCTTCAGCCAAGATCTGAAAACTTTGTTTTGGAGGGTCAGAAACAAGTGCAAATGAAACTGATTAGTAACACAAAGCGTGAAGAAGCTAGTGGTTGGAGGGATGCGGATGTGAGTTCTGAACACAATGACACCTCATATCCATACAATTCCTTTATGGAGAATATTAATTCATGTAGCACTGCACTTGCAGCCGATAAGTCTCAAGTAGATTTTGCATGCTTCCCTTTTGGTTTCTTTGATTCTGTGGATTGTAATAGAATTAAGCTTCATGGTGTCAATTGTCATGAAAATGGGGTATTGCACTTACCGGATCCTTCAGATATGCAACTCCAAAAAAATTTGGAAAAGAAGTTGGAGTTCCCATCAGAATTGAGTCATGTGGACACATCATATACATCTTTAAGGTTCTCTGCTGGTAGTGAGCTGCATGAAGCATTAGGTCCAGCTTTTCTGAAACAGAGCAACTATTGTGATTGGGAAACAGAGAAGGCTGAAACCGAGACAACTATTGAGTTGCCAGAGGGGATGAGCAGCAGCCAATTGACGTCAGATTCTGGATCGGAGAATCTTCTAGAGGCAGTGGTAGCTAAAGTTTGCCAAAGTGGTAGTGATGTTAAAAGTGAGAAATCATTCTGTCAGTCAATGCAATCTCTGTTGACAACTGAAAAAATTCCAGAGCCTTCTAGCCATACTATACATACTGTTACTTCAGCAGGTTATTCAATCGATCAGTCCTCTCTTGTAGAAGAGACACAAAACTGCTTCAAATCATCAGAGGTATGTGGTGTAACATCTCAGCAGGGGATTTCATCAATTTGTCCAAGTTCATGTAGTGAGCAGTTGGAGCGGTCTGCAGAACCATCTAAGGTCAACAAAAAGAGGGCTAGACCTGGTGAAAGTTGTAGGCCTAGGCCAAGGGACAGACAATTAATTCAAGATCGTATAAAGGAGCTGAGAGAGCTTGTGCCAAATGGGTCAAAGTGCAGTATTGATTCACTGCTGGAGCGCACAATCAAGCACATGCTATTTCTGCAGAGCATCACGAGACATGCTGACAAGCTAAACAAATGTGCTGAATCAAAGTTGCATAGCAAGGAAACAGGTGTGCTAGGCTCCTCTAATTATGAACAGGGTTCAAGCTGGGCAGTGGAGGTGGGAAGCCATATGAAGGTTTGTCCTATAATAGTAGAGAATCTTAACATGGACGGTCAGATGGTTGTAGAGATGGTGTGTGAGGAATGCAGCCGTTTTCTTGAGATAGCTGAAGCCATCAGAAGCTTGGGTCTGACAATCTTAAAAGGTGTGACAGAGGCCCGTGGCGAGAAGACATGGATATGTTTTGTGGTTGAGGGGCAGAACAGCAGAAACATGCGAAGAATGGATATCTTGTGGTCACTTGTGCAGATTTTGCAACCCAAGCCTACAATGTAA 2253 0.4279 MATDLQQTLRSLCFNTEWKYAVFWKLKHRARMVLTWEDAYYDNHDQHDPLEDKCFSKTPDTLHDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDKHTTNSSSSFEYCDGWQAQFSAGIKTIVVVAVVPHGVVQLGSLQQQVVEDLKLVSRIKDVFFALQDSSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHKERPNVWSPMFPIFGKHNDSSFIFQLPAIHQNRAVNMFNKDGGLELSSSQSDESTKFLQPRSENFVLEGQKQVQMKLISNTKREEASGWRDADVSSEHNDTSYPYNSFMENINSCSTALAADKSQVDFACFPFGFFDSVDCNRIKLHGVNCHENGVLHLPDPSDMQLQKNLEKKLEFPSELSHVDTSYTSLRFSAGSELHEALGPAFLKQSNYCDWETEKAETETTIELPEGMSSSQLTSDSGSENLLEAVVAKVCQSGSDVKSEKSFCQSMQSLLTTEKIPEPSSHTIHTVTSAGYSIDQSSLVEETQNCFKSSEVCGVTSQQGISSICPSSCSEQLERSAEPSKVNKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITRHADKLNKCAESKLHSKETGVLGSSNYEQGSSWAVEVGSHMKVCPIIVENLNMDGQMVVEMVCEECSRFLEIAEAIRSLGLTILKGVTEARGEKTWICFVVEGQNSRNMRRMDILWSLVQILQPKPTM* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0606 750 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 569 618 IPR011598 GO:0046983
Vvi7g0606 750 MobiDBLite consensus disorder prediction 558 580 - -
Vvi7g0606 750 MobiDBLite consensus disorder prediction 559 580 - -
Vvi7g0606 750 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Vvi7g0606 750 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 747 IPR043561 GO:0003700|GO:0006355
Vvi7g0606 750 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 582 632 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0606 Vvi-Chr7 5890512 5898270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0606 1 747 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 44.114 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0606 - - vri:117918272 1489.94