Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0595 ATGGAAGAAGAAAAATTCAATGTAGTGGGCTTTCCGTTGAAAATTGAAATGGGCACTTCAGTGAAGATCACTGTTGGTTCTCATGTTTGGGTTGAAGACTCGGCATTGGTTTGGATTGATGGACAAGTATCAAAGATTACTGGACAGGATGCTGAGATACAAACTAGTAATGAAAAGACGGTGGTTGCAAATTTATCAAAATTATATCCAAAAGATATGGAGTTTCCTGCCCATGGAGTTGCTGACATGACTAAGCTTTCATATTTGCATGAGCCTGGAGTTCTGCAGAATTTGGCAATTAGATATGAACTCAGTCAAATCTATACTTACACTGGAAATATTCTTATTGCCATCAATCCATTCCAAGGTCTTCCTCATTTATATGATACACACGCTATGGAGAAATACAAGGGAGCACCACTTGGAGAATTGAGCCCTCATGTTTTTGCCATTGCTGATGTTGCTTATAGGGATATGGCCAATGAGGGGAAAGGCAACTCCATTCTGGTCAGTGGTGAAAGTGGGGCTGGTAAGACAGAAACCACTAAAATGCTTATGCGCTACCTTGCTTATTTGGGTGGCAATACTGTTACAGAAGGACGGTCTGTTGAACAAAAAGTTCTGGAATCAAATCCGGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGAAATAACAATTCAAGCCGTTTTGGTAAATTTGTTGTGATTCAATTTGATAAGCATGGGCGAATATCAGGGGCAGCCATTAGAACTTATCTTCTTGAGAGATCTCGTGTTTGCCAAATTTCAGATCCTGAACGCAACTATCATTGTTTTTACCATCTTTGTGCAGCACCACCAGAGGAAATCGAGAGATATAAGTTGGGAAATCCTAAATCATTTCACTACCTTAATCAATCAAATTGCCATGAACTGCTGGATGTAAATGATGCCCAGTATTATCTTGCTACTAGAAGAGCTATGGATATTGTTGGAATAAGTGAAAAGGAACAGGAGGCTATTTTCAGAGTTGTGGCTGCAATTCTTCATCTTGGTAATATTGATTTTGCTAAGGGGGAAGAAGTTGATTCATCAGTTTTGAAAGATGACAAAGCTAAATTCCATCTTCAAATGACTTCAGAACTTCTCATGTGTGATCCTCATGCATTGGAAGATGCACTATGTAAGCGAGTGATGGTCACACCTGAAGAAGTTATCAAGAGAAGTCTTGATCCTCTTGGTGCTGCAGTTAGCAGGGATGGCTTAGCGAAGACAATATATTCTCGCTTGTTTGACTGGTTGGTGAATAAGATTAATTTCTCAATTGGGCAAGATCCTAATTCAAAATCTACGATTGGGGTCCTTGACATCTATGGTTTTGAAAGCTTCAAAACTAATAGTTTTGAACAGTTCTGTATTAATTTCACAAATGAGAAGCTGCAACAACATTTTAACCAGCATGTATTTAAGATGGAGCAAGAGGAGTACTCAAAAGAGGGAATTGACTGGAGCTACATAGAATTTATTGATAATCAAGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATCATTGCCCTGCTTGATGAAGCTTGTATGTTTCCAAAGTCAACCCATGAGACATTTTCGAATAAGCTTTATCAGACATTCAAAGTTCACAAACGCTTTATCAAGCCAAAGTTGGCTCGCACAGATTTCACCATTGCTCATTATGCAGGAGAAGTTCAATACCAGTCTGATCAATTTCTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCAGGACTTGTTAAGTGCCTCCAAATGTTGTTTTGTTGCAGGCCTTTTCCCTCTACTTTCTGAGGAGACAATGAAATCTTCGAAGTTTTCCTCTATTGGTTCTCATTTTAAGCTACAACTACAACATTTAATGGACACACTTAATTCCACACAACCTCATTACATTAGATGTGTGAAGCCCAACACTCTTTTAAAGCCTGCCATATTTGAGAATGCCAATGTCATGCAACAACTACGTTCTGGTGGCGTTCTAGAGGCAATTAGAATCAGTTGTGCTGGATATCCTACTCACAGGACATTTTCTGAATTTGTAAATCGGTTTCATATTCTTTCTCCAGAGGTTTTGACAGAGAATCATGAAGAGAAGTTTGTATGTCAAAAGATTCTGGAAAAGTTGGGGTTTACCGGGTTTCAGATTGGAAATACAAAAGTTTTCCTGAGAGCTGGTCAGATGGCTGAGTTAGATGCACGAAGAGCAGAAGTACAGGGAAATGCAATTAAGATTATTCAAAGGCGGACTAGAACTCATATTGCTCGTAAACAGTATGTTGCTTTGCGGGTGGCGACTATTCATGCACAATCTCTATGGAGAGAAAAAGTTGCTTGCAAGTTATATGCACACATGAGGCAGGAGGGGGCTGCAATTAAAATTCAGAAGAATCTTCGTAGACACCTGGCCAGAAAGGTCTACACCAAACTCATGTCTTGTGCACTTGTCTTGCAGACAGGTTTACGAGCAATGGCTGCTCATGATGAATTCAGATATAGAAAGGAAACCAAGGCAGCAATTATCATTCAGGCCCGTTGGCGCTGTCATAGAGATTTTTCATGCTATAAGAAACTCAAAAGAGCATCAATCATATCACAATGTGGATGGAGGGGGAGAATTGCCAGGAAAGAGCTGAGACAACTAAGCATTGCTGCTAAAGAAACAGGTGCACTCCAGGAAGCCAAAGCTAAGCTTGAAAAACAAGTGGAGGAGCTCACAAGAAGTTTGCAGTTGGAAAGACGTTTGAGGGCTGAACTGGAAGAAGCAAATGAACAGGAAATAACAAAGTTGCAACAATCCTTACGAGCTATGCGGAATGAAGTTGATGAAACAAATGCATTGCTTGTCAAGGAATGTGAGGCTGCTGAGAGGTCATTTGAAGAAGCACCTCCTATTATCAAAGAAACCCTCTCTCTTGTTGAAGATACTGACAAGATTAATAATCTATCTGCAGAGGTGGAAAAATTGAAGGCTTTGCTGCAATCAGAAAAACAAAGAGCTGATGACTTTGAAAGGAAATTGGAAGAAGCCGAGGAATCCAGTGAAGCAAGACGTAAGAGGTTAGAAGAAACTGAGAGAAGAGTTCAGCAACTCCAGGAATCTTTGAACAGGATGATATACAGCATGTCAGAACAGGTCTCAGCGCTGAAAATGATCTTGCATACGTCGTCAAACTCGAGTTCAACATCAGGGTCTATTGCTAGATATGACCGGGTTGATGTCGTTTCTTCTACCTCTGATGCTACATCCACTGCCTCTGATTTTACTTTTCCAACCCCTGTTCCAAGTTCAGTGACTTACTCTTCTTTCCATCCGGATGCTCTCCAGATGATTGTTCAGGATCTTTCAGTAACTGAAATTTCAGGATCTGAACACTGGGAAAGCGATCGGGAGGGGGCATTCGATGACTTTTTTTGA 3453 0.4023 MEEEKFNVVGFPLKIEMGTSVKITVGSHVWVEDSALVWIDGQVSKITGQDAEIQTSNEKTVVANLSKLYPKDMEFPAHGVADMTKLSYLHEPGVLQNLAIRYELSQIYTYTGNILIAINPFQGLPHLYDTHAMEKYKGAPLGELSPHVFAIADVAYRDMANEGKGNSILVSGESGAGKTETTKMLMRYLAYLGGNTVTEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVVIQFDKHGRISGAAIRTYLLERSRVCQISDPERNYHCFYHLCAAPPEEIERYKLGNPKSFHYLNQSNCHELLDVNDAQYYLATRRAMDIVGISEKEQEAIFRVVAAILHLGNIDFAKGEEVDSSVLKDDKAKFHLQMTSELLMCDPHALEDALCKRVMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINFSIGQDPNSKSTIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYSKEGIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKVHKRFIKPKLARTDFTIAHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSASKCCFVAGLFPLLSEETMKSSKFSSIGSHFKLQLQHLMDTLNSTQPHYIRCVKPNTLLKPAIFENANVMQQLRSGGVLEAIRISCAGYPTHRTFSEFVNRFHILSPEVLTENHEEKFVCQKILEKLGFTGFQIGNTKVFLRAGQMAELDARRAEVQGNAIKIIQRRTRTHIARKQYVALRVATIHAQSLWREKVACKLYAHMRQEGAAIKIQKNLRRHLARKVYTKLMSCALVLQTGLRAMAAHDEFRYRKETKAAIIIQARWRCHRDFSCYKKLKRASIISQCGWRGRIARKELRQLSIAAKETGALQEAKAKLEKQVEELTRSLQLERRLRAELEEANEQEITKLQQSLRAMRNEVDETNALLVKECEAAERSFEEAPPIIKETLSLVEDTDKINNLSAEVEKLKALLQSEKQRADDFERKLEEAEESSEARRKRLEETERRVQQLQESLNRMIYSMSEQVSALKMILHTSSNSSSTSGSIARYDRVDVVSSTSDATSTASDFTFPTPVPSSVTYSSFHPDALQMIVQDLSVTEISGSEHWESDREGAFDDFF* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0595 1150 Gene3D - 683 749 - -
Vvi7g0595 1150 Gene3D Kinesin motor domain 82 678 IPR036961 -
Vvi7g0595 1150 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Vvi7g0595 1150 Gene3D Myosin VI head, motor domain, U50 subdomain 328 617 - -
Vvi7g0595 1150 ProSiteProfiles Myosin motor domain profile. 78 748 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 Gene3D - 801 848 - -
Vvi7g0595 1150 Gene3D - 849 897 - -
Vvi7g0595 1150 Gene3D - 751 800 - -
Vvi7g0595 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 799 IPR027417 -
Vvi7g0595 1150 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 24 73 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 PANTHER MYOSIN 70 1059 - -
Vvi7g0595 1150 FunFam Myosin 2 328 442 - -
Vvi7g0595 1150 ProSiteProfiles IQ motif profile. 751 778 IPR000048 GO:0005515
Vvi7g0595 1150 Gene3D - 268 326 - -
Vvi7g0595 1150 Gene3D - 455 639 - -
Vvi7g0595 1150 Coils Coil 896 959 - -
Vvi7g0595 1150 Pfam Myosin head (motor domain) 81 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 SMART iq_5 798 820 IPR000048 GO:0005515
Vvi7g0595 1150 SMART iq_5 750 772 IPR000048 GO:0005515
Vvi7g0595 1150 SMART iq_5 869 891 IPR000048 GO:0005515
Vvi7g0595 1150 SMART iq_5 846 868 IPR000048 GO:0005515
Vvi7g0595 1150 FunFam Myosin heavy chain 268 323 - -
Vvi7g0595 1150 SMART MYSc_2a 72 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 Coils Coil 984 1053 - -
Vvi7g0595 1150 FunFam Class V myosin 455 595 - -
Vvi7g0595 1150 ProSiteProfiles IQ motif profile. 799 824 IPR000048 GO:0005515
Vvi7g0595 1150 FunFam unconventional myosin-Va 850 897 - -
Vvi7g0595 1150 Pfam Myosin N-terminal SH3-like domain 25 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 CDD MYSc_Myo11 92 736 IPR036018 -
Vvi7g0595 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 899 IPR027417 -
Vvi7g0595 1150 PRINTS Myosin heavy chain signature 445 473 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 PRINTS Myosin heavy chain signature 108 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 PRINTS Myosin heavy chain signature 498 526 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 PRINTS Myosin heavy chain signature 165 190 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 PRINTS Myosin heavy chain signature 212 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi7g0595 1150 FunFam unconventional myosin-Va 801 849 - -
Vvi7g0595 1150 Pfam IQ calmodulin-binding motif 802 819 IPR000048 GO:0005515
Vvi7g0595 1150 Pfam IQ calmodulin-binding motif 848 862 IPR000048 GO:0005515
Vvi7g0595 1150 Pfam IQ calmodulin-binding motif 753 771 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0595 Vvi-Chr7 5729058 5780163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0595 17 1050 Myosins gene family AT1G54560 75.048 0.0 1635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0595 K10357 - vvi:100265237 2204.1