Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0581 ATGGCCACCAAATTACGGAGACATCGTCCTACTGCCCACCGTCGTTTCCTCTGCTTTTCACTTGTTGTTGTCCTAGGCATCTGCTGGGCTGTGGCCATGGAAGGGACTTCTTTATCTTCTTATTCTTCTTCTTCTTGGGATGATAAATTAACATTGCTTGAGCTCAAATCCTGTGTCACCCAAGACCCACTAGGGTTTCTCACCAATTGGAACCCCAACGACCCAGACCCTTGTTCTTGGAACGGTGTCATCTGTGACACCCTTTCCCGCCGTGTTACTGCCTTGGATCTCTCATCCAACCGTAACTGCTCCTTTCTTTCCCTTTTTGCTACTCCTGCTAGTGATGTTCATGCTGCATGCTTGCTAGGAGGAGGGTTCAACAAGAGTTCATCATCTGCTTCAAAATTGAGGGGGAGGTTGCCCCCCATCGTCGGTCGTCTCTCTCAACTTAGGGTTCTGTCGCTAGGGTTTAATGGGTTTTTCGGAGAGGTGCCCCGGGAGATTGGCCACCTGGCCCTTCTGGAGGTTCTGGACGTTGCCTCTAACGCTTTTCACGGACCCATACCCCCTGCTCTTCGAAACTGCACCGCACTGCGGGTGGTTAATCTTTCGGGGAATCGGTTCAATGGAACAATTCCGGAGTTGCTTGCTGACTTGCCCAGTCTGCAAATACTTTCCCTTTCGTATAATATGCTCAGTGGAGTTATTCCGGAGGAATTGGGTCACAACTGTGGGACTCTGGAGCATCTTTACCTCACCGGGAATTCTCTGTCTGGTTCCATTCCTGCCAGCTTGGGAAATTGCAGTATGCTCCGTTCCCTCTTCTTGTCTTCTAATAAGTTTGAGAATGAAATTCCTTCTTCTTTTGGGAAACTTGGGATGCTTGAAGCTCTGGACTTATCCAGGAATTTCTTGAGTGGGATCATACCATCCCAATTAGGCAACTGCACGCAGTTGAAACTGCTTGTGCTCAAGAACAACTTTGGCCCTCTATTATTATGGAGAAATGAGGAGGTGGAAGATTACAATTATTTTGTTGGCCAACTGCCCAATAGTATAGTAAAACTTCCCAATCTTCACGTCTTTTGGGCCCCCCAAGCAAATCTTGAGGGCATTTTCCCTCAGAACTGGGGGTCTTGTTCTAACCTGGAGATGCTGAATTTAGCCCAGAATTACTTTACAGGACAAATACCCACATCCCTGGGCAAATGTAAGAGCTTGTACTTTCTTGATCTGAATTCCAATAACTTGACTGGGTTTCTTCCCAAAGAAATTTCTGTTCCCTGCATGGTTGTCTTCAACATCAGTGGAAATTCTCTGTCTGGAGATATTCCGAGATTTTCTCAGAGTGAGTGTACTGAGAAGGTCGGAAATCCATGGATGTCAGACATAGATTTGCTTGGTCTCTACTCTTCCTTCTTTTATTGGAATGCTGTCACCAGTATTGCTTACTTTTCTTCACCTTCCTATGGTCTGGTCATGCTGCATGATTTTAGCAACAATCTGTTCACTGGCTTGGTTCCTCCCTTGTTGATCACTTCTGATAGATTATCTGTTAGACCTTCATATGGATTTTGGGTTGAGGGCAATAATCTCAAGGGAAATACTTCAACTTTATCATTTGATAGCTGCCAGAGTTTGAATAGCCTGGTCTTCGATATTGCTTCCAACAAAATTACTGGTGAACTTCCTCCAAAATTAGGCAGTTGTAAATATATGAAACTTTTAAATGTGGCAGGAAATGAACTAGTTGGTTCAATTCCTCTCTCATTTGCTAACTTGTCTTCCCTTGTTAACCTCAACCTCAGTGGAAACAGATTGCAAGGTCCTATACCATCATATATTGGTAAGATGAAGAATTTGAAGTATCTTTCCTTGTCTGGAAACAATTTTAGTGGTACAATACCACTGGAGCTATCTCAATTGACTTCATTGGTGGTGCTGGAACTTTCTTCAAACTCCCTCTCAGGACAGATACCATCTGATTTTGCCAAGCTTGAGCATCTTGATATTATGCTATTAGACCACAACCACCTCTCTGGGAAGATACCATCCAGCTTTGGTAACTTGACCTCGCTTTCAGTACTCAATGTGTCTTTCAACAATTTATCTGGATCTTTCCCTCTCAATTCAAATTGGGTAAAATGTGAAAATGTGCAAGGGAATCCAAATCTTCAGCCTTGTTATGATGATTCATCATCCACTGAATGGGAGCGGCGGCACTCTGATGATGTTTCCCAACAAGAAGCTTATCCTCCCACTGGAAGCAGAAGTAGAAAGAGCGACGTGTTTAGTCCTATAGAGATTGCCTCCATAACATCTGCCTCAATCATTGTTTTTGTTCTTATAGCATTAGTTCTCCTCTATGTGAGCATGAAGAAATTTGTATGCCACACTGTGTTGGGTCAAGGATCAGGAAAGAAAGAGGTTGTAACTTGCAACAACATTGGTGTTCAGCTGACCTATGAGAATGTTGTCAGGGCCACTGGAAGTTTCAATGTTCAAAACTGCATTGGAAGTGGAGGTTTTGGAGCCACATACAAAGCTGAGATTGTTCCCGGGGTTGTGGTGGCAGTGAAGCGGCTCTCAGTTGGGAGGTTTCAAGGCGTTCAACAGTTTGCTGCTGAGATCAGAACACTTGGAAGAGTGCAGCATCCAAACCTTGTTACACTAATAGGCTATCATGTCAGTGAGGCAGAAATGTTCCTAATCTACAACTACTTACCAGGAGGCAATCTGGAAAAATTCATCCAGGATCGGACAAGGAGAACTGTTGAATGGAGCATGCTTCACAAGATTGCTTTGGATATTGCACGTGCCCTTGCTTATTTGCATGATGAATGTGTCCCAAGAGTGTTGCACCGTGATATCAAACCAAGCAATATATTGCTGGATAATAACTTCAATGCATATCTTTCTGATTTTGGCCTTGCCAGACTTTTGGGTACTTCTGAAACTCATGCCACTACTGATGTAGCAGGAACTTTTGGTTATGTTGCTCCAGAATATGCGATGACATGTCGTGTTTCAGATAAGGCAGATGTGTATAGCTATGGTGTTGTCCTTCTAGAATTGATTTCTGACAAGAAGGCTTTGGATCCATCCTTCTCTTCCTTTGGAAATGGCTTCAACATTGTAGCCTGGGCAAGTATGCTCCTCAGGCAGGGCCAGGCATGTGACTTTTTCACAGCTGGACTATGGGAATCTGGACCCCATGATGATCTAATCGAGATACTTCACTTGGCTATTATGTGCACAGGTGAGTCTCTTTCCACCAGGCCTTCTATGAAGCAAGTTGCCCAACGGCTGAAGCGGATTCAGCCCCCAACATGCTAG 3336 0.4427 MATKLRRHRPTAHRRFLCFSLVVVLGICWAVAMEGTSLSSYSSSSWDDKLTLLELKSCVTQDPLGFLTNWNPNDPDPCSWNGVICDTLSRRVTALDLSSNRNCSFLSLFATPASDVHAACLLGGGFNKSSSSASKLRGRLPPIVGRLSQLRVLSLGFNGFFGEVPREIGHLALLEVLDVASNAFHGPIPPALRNCTALRVVNLSGNRFNGTIPELLADLPSLQILSLSYNMLSGVIPEELGHNCGTLEHLYLTGNSLSGSIPASLGNCSMLRSLFLSSNKFENEIPSSFGKLGMLEALDLSRNFLSGIIPSQLGNCTQLKLLVLKNNFGPLLLWRNEEVEDYNYFVGQLPNSIVKLPNLHVFWAPQANLEGIFPQNWGSCSNLEMLNLAQNYFTGQIPTSLGKCKSLYFLDLNSNNLTGFLPKEISVPCMVVFNISGNSLSGDIPRFSQSECTEKVGNPWMSDIDLLGLYSSFFYWNAVTSIAYFSSPSYGLVMLHDFSNNLFTGLVPPLLITSDRLSVRPSYGFWVEGNNLKGNTSTLSFDSCQSLNSLVFDIASNKITGELPPKLGSCKYMKLLNVAGNELVGSIPLSFANLSSLVNLNLSGNRLQGPIPSYIGKMKNLKYLSLSGNNFSGTIPLELSQLTSLVVLELSSNSLSGQIPSDFAKLEHLDIMLLDHNHLSGKIPSSFGNLTSLSVLNVSFNNLSGSFPLNSNWVKCENVQGNPNLQPCYDDSSSTEWERRHSDDVSQQEAYPPTGSRSRKSDVFSPIEIASITSASIIVFVLIALVLLYVSMKKFVCHTVLGQGSGKKEVVTCNNIGVQLTYENVVRATGSFNVQNCIGSGGFGATYKAEIVPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRTRRTVEWSMLHKIALDIARALAYLHDECVPRVLHRDIKPSNILLDNNFNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELISDKKALDPSFSSFGNGFNIVAWASMLLRQGQACDFFTAGLWESGPHDDLIEILHLAIMCTGESLSTRPSMKQVAQRLKRIQPPTC* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0581 1111 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 340 421 - -
Vvi7g0581 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 952 964 IPR008271 GO:0004672|GO:0006468
Vvi7g0581 1111 Pfam Protein kinase domain 833 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0581 1111 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Vvi7g0581 1111 SUPERFAMILY L domain-like 535 709 - -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 339 398 IPR032675 -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 399 463 IPR032675 -
Vvi7g0581 1111 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 242 329 - -
Vvi7g0581 1111 MobiDBLite consensus disorder prediction 725 761 - -
Vvi7g0581 1111 SUPERFAMILY RNI-like 135 446 - -
Vvi7g0581 1111 Pfam Leucine rich repeat 197 257 IPR001611 GO:0005515
Vvi7g0581 1111 Pfam Leucine rich repeat 271 327 IPR001611 GO:0005515
Vvi7g0581 1111 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 491 733 - -
Vvi7g0581 1111 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 908 1111 - -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 490 735 IPR032675 -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 132 243 IPR032675 -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 244 331 IPR032675 -
Vvi7g0581 1111 MobiDBLite consensus disorder prediction 747 761 - -
Vvi7g0581 1111 SMART LRR_typ_2 690 714 IPR003591 -
Vvi7g0581 1111 SMART LRR_typ_2 219 243 IPR003591 -
Vvi7g0581 1111 SMART LRR_typ_2 594 618 IPR003591 -
Vvi7g0581 1111 SMART LRR_typ_2 642 665 IPR003591 -
Vvi7g0581 1111 SMART LRR_typ_2 147 171 IPR003591 -
Vvi7g0581 1111 SMART LRR_typ_2 292 316 IPR003591 -
Vvi7g0581 1111 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 798 907 - -
Vvi7g0581 1111 Pfam Leucine Rich Repeat 665 690 IPR001611 GO:0005515
Vvi7g0581 1111 Gene3D Phosphorylase Kinase; domain 1 798 907 - -
Vvi7g0581 1111 Gene3D Ribonuclease Inhibitor 41 131 IPR032675 -
Vvi7g0581 1111 Gene3D Transferase(Phosphotransferase) domain 1 908 1107 - -
Vvi7g0581 1111 SMART serkin_6 832 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0581 1111 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 39 452 - -
Vvi7g0581 1111 SUPERFAMILY Protein kinase-like (PK-like) 815 1103 IPR011009 -
Vvi7g0581 1111 CDD STKc_IRAK 838 1106 - -
Vvi7g0581 1111 ProSitePatterns Protein kinases ATP-binding region signature. 838 860 IPR017441 GO:0005524
Vvi7g0581 1111 ProSiteProfiles Protein kinase domain profile. 832 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0581 Vvi-Chr7 5045374 5048709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0581 27 1111 Receptor kinase-like Gene Family AT3G02130 51.316 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Vvi7g0581 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0581 - - vvi:104879811 2182.53