Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0573 ATGGATGTTGGATTAGAAGGGGAGCCGTTTCTGTCTTCCAGGCTCGAGCCCATTCTGGAGGTGGAGGTGGAGGTGGAGACGGAGGGTGAGGGTGAGGTCGATGATCAATTCCCATTCAACATTTCGGAACCCACCATCTCCAACCAAGACATTCGAGACCCTTGTGCCCCTGGACCATCTACTACCCATTTCTTGCCCCGCAAAACCATTCACCGCTGCAAGACCGCGCCGGCCTTAGCCGTTATGCGAGACGCCAAATCGCAGCCGGCCCAACTCCCCAAACCCAACTCTGACTCTACCTCCATCATCAGACAGGCCTTCTTCTTGCTCTTTCTCTATCTCTCCCTGGGCGTCGTTATCTACTCCTTCAATCGGGACAACTTCTCCGGCATCGAGACCCACGCCGTGGTCGACGCCCTTTACTTCTGTATCGTCACCATGTGCACCATAGGCTATGGCGATATCGCTCCTCTCACCCCCGCCACCAAGGTCTTCGCCTGCGTTTTTGTACTGGTGGGCTTTGGATTCATAGACATATTGTTGAGTGGGGTCGTGAATTATGTTCTTGATTTGCAGGAGAACATGATTTTGACTGGCATTCAGGTGGGTGGAGCACCAGCCGGTGGCTTTTCTGCTAGGAACTATATAGTCGATGTGGAGAAGGGAAGAATGAGAATCAGATTGAAAGTTGGGTTAGCTCTAGGAGTAGTTGTACTATGCATTGGTATGGGCACAATGGTGCTGTATTTTGTGGAGAATTTAGACTGGATTGATGCTGTTTACTTGTCTGTCATGTCAGTCACCTCGGTTGGATATGGGGATAGGGCCTTCAAGACTCTGCCCGGTCGCTTGTTTGCTGCAATTTGGCTTCTCTTCTCAACCCTGGCAGTGGCTCGGGCTTTTCTGTATTTAGCAGAGGCAAGGATTGATAAGAGGCATAGGAGAATTACAAAGTGGGTGTTGCATAGGGAAATTACAGTCGAGGATTTGCTTGCGGCTGATATCAACAACAATGGTTTCATTAGTAAATCAGAATATGTCATCTACAAGCTCAAGGAGATGGGGAAGATTGCGGAAAATGATGTATTGCAGATCTGTAATCAGTTCAACAAGCTTGACCCCAACAACTCTGGAAAAATAACCCTGCCTGATCTCTTGGAGAATCACTTGTGA 1173 0.491 MDVGLEGEPFLSSRLEPILEVEVEVETEGEGEVDDQFPFNISEPTISNQDIRDPCAPGPSTTHFLPRKTIHRCKTAPALAVMRDAKSQPAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENHL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0573 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 136 363 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vvi7g0573 390 FunFam Two-pore potassium channel 3 213 327 - -
Vvi7g0573 390 SUPERFAMILY Voltage-gated potassium channels 99 188 - -
Vvi7g0573 390 FunFam Two-pore potassium channel 5 91 201 - -
Vvi7g0573 390 PRINTS Two pore domain K+ channel signature 145 173 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vvi7g0573 390 PRINTS Two pore domain K+ channel signature 268 277 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vvi7g0573 390 Pfam Ion channel 237 305 IPR013099 -
Vvi7g0573 390 Pfam Ion channel 109 188 IPR013099 -
Vvi7g0573 390 SUPERFAMILY EF-hand 332 386 IPR011992 -
Vvi7g0573 390 Gene3D - 215 325 - -
Vvi7g0573 390 Gene3D - 94 197 - -
Vvi7g0573 390 Gene3D - 326 390 - -
Vvi7g0573 390 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Vvi7g0573 390 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Vvi7g0573 390 SUPERFAMILY Voltage-gated potassium channels 221 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0573 Vvi-Chr7 4997799 5000532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0573 48 390 Ion Channels AT4G01840 67.241 2.40e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0573 K05389 - vvi:100257187 753.051