Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0572 ATGGCTCTCTCTGTGATCAGAACAAATCAAGGCCTTGTTCAGCCATCCAAGAAGACCCCTTCTGGTACACTTGATCTGTCGATTATTGATAGATTACCTGTCCTAAGGTGCAATGCTCGGACACTGCATGTGTTCAGGCATGGCCCTGGTGCAGCACAAGTCATACGAGAAGCCTTGTCCACGGCATTGGTTCCCTACTATCCTCTTGCTGGACGGCTGAAAGAGTCGAGCCATGGCGAGCTTCAAATTGAATGTTCTGGGGAAGGTGTGTGGTTTGTTGAGGCATCTGCTGAGTGTATGCTTGATTCAGTCCATTACTTTGACGACACTGCATCCATCCCCTATGATGAGCTTCTCCCTGATCACATCCCAGAAGCTGAAGGCATAAATCCACTTGTGCTAATGCAGGTGACTCAATTTGCATGTGGTGGATTTGTCATGGGCCTCATATTCTGTCATAGCATTTGTGATGGCTTAGGAGTCGCCCAGTTCCTAAATGCTGTTGGGGAAATGGCCAGAGGCCTTGAGAATCCAAGCATTGCGCCAGTGTGGTGTAGGGACTTTTCTCCACCTCCTCCCCAAGTCCCACAAACAAATCCCACTGTCTTGCCAAACTTACCACCCCCCATGCCTGACTACCAGCTGCAGCATGCCAATATAGACATTCCCCTGGATCAGATCAATCAGCTAAAGCATGAGTTCCAGAAGTCCACAGGCCAAACTTGCTCCACCTTTGAACTTGTAGTTGCCAGTATCTGGCACCATCGAACACAAGCTATAAACTTGGGAGAGAACACCCAAGTCAAGCTTGTCTTCTTTGCAAATTGCCGCCCGTTCTTGCAGCCTCCTTTGCCACAAGGCTTCTATGGCAACTGTTTCTTCCCAGTGACCATCACAGCTTCCAGTGAGACACTGGCACGGTCGTCAACTGCTGATGTGGTAAAACTGATCCAGGAGGAAAAAGTTAAGTTATCAAACGAATTTTGCAGGTGGTTGAAGGGCGAACTGGTTGAAGATGGGGTAGATCCATTTGCACCACCCCTCATCTACACCACATTGTTTATATCAGAGTGGGGCAGACTGGGGTTTAACCAAATTGACTATGGGTGGGGCGCCCCAGTTCATGTGGTTCCAATACAAGGCTCTGCCATCATACCCGTTTGCATTGTTGGATTGCTGCCCTCACCAAAGAAAGGCATCCGTTTGATGACATGGTGTGTTGAGGAGGCTCATCAGCAACCCTTCCTTGATTTGATGTTGAAGTCAAGTACTTGA 1275 0.4863 MALSVIRTNQGLVQPSKKTPSGTLDLSIIDRLPVLRCNARTLHVFRHGPGAAQVIREALSTALVPYYPLAGRLKESSHGELQIECSGEGVWFVEASAECMLDSVHYFDDTASIPYDELLPDHIPEAEGINPLVLMQVTQFACGGFVMGLIFCHSICDGLGVAQFLNAVGEMARGLENPSIAPVWCRDFSPPPPQVPQTNPTVLPNLPPPMPDYQLQHANIDIPLDQINQLKHEFQKSTGQTCSTFELVVASIWHHRTQAINLGENTQVKLVFFANCRPFLQPPLPQGFYGNCFFPVTITASSETLARSSTADVVKLIQEEKVKLSNEFCRWLKGELVEDGVDPFAPPLIYTTLFISEWGRLGFNQIDYGWGAPVHVVPIQGSAIIPVCIVGLLPSPKKGIRLMTWCVEEAHQQPFLDLMLKSST* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0572 424 Gene3D - 202 419 IPR023213 -
Vvi7g0572 424 PANTHER ACYL TRANSFERASE 4 3 420 - -
Vvi7g0572 424 Pfam Transferase family 5 384 - -
Vvi7g0572 424 Gene3D - 2 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0572 Vvi-Chr7 4985311 4986765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0572 9 421 Monolignol Biosynthesis Gene Families AT5G48930 28.378 1.76e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0572 - - vvi:100260553 840.491