Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g0571 | ATGAACAAAACCGCCAAAAGGACACAATTTGCTTTATTTATCCTGAACATGTTACTTAAGCCTATAAGGGTCTTTAGGTTTTCTTTTTCAAATTTTGTTTTTGTTCAGGTAGGGAAATTTATACAGCTGGTATCGACTTTCATTGGAGGCTTTATCATAGCATTCATTAAAGGGTGGCTGCTTACCCTTGTCATGCTATCATCAATTCCTCTTCTTGTGATAGCTGGTGGAGCTATGTCTCTCTTCTTATCCAAGATGGCGACCCGCGGACAAAACGCTTATGCAAAAGCAGCAACTGTAGTAGAACAGACAATCGGCTCAATTAGAACAGTTGCATCATTTACTGGGGAAAAGCAAGCTGTAACTAAATACAATCAGTTTCTGGTAAATGCTTACAAATCAGGTGTTTTCGAAGGTCTGGCTGCAGGATTAGGCCTTGGAACAGTTATGTTCATCATCTTTGCAAGTTATGCATTGGCAGTATGGTTTGGTGCAAAGATGATACTGGAAAAAGGATATACTGGGGGTACAGTTCTGAATGTCATTATTGCCGTATTGACTGGTTCCATGTCTCTAGGGCAGGCATCTCCTTGCATGAGTGCATTTGCTGCTGGACAGGCTGCAGCATTCAAGATGTTTCAGACGATACACAGGAAGCCAGAGATAGATGTTTCTGACACCAAAGGGAAGAAATTGGAGGACATTCAAGGAGAGATAGAGTTAAGGGATGTATACTTTAGCTATCCAGCCAGACCAGATGAGCAAATCTTCAGTGGATTCTCTCTTTCCATCCCTAGTGGCACAACTGCAGCTTTGGTTGGACAGAGTGGAAGTGGGAAGTCAACAGTAATTAGTCTGATAGAGAGGTTTTATGATCCCCTTGCTGGTGAAGTTCTTATAGATGGTATTAATCTGAAGGAGTTTCAGCTTAGATGGATTAGGGGGAAAATTGGTCTTGTCAGCCAGGAACCAGTCTTGTTCACATCCAGCATTAGGGATAATATTGCATATGGAAAAGAGGGTGCAACTATTGAAGAGATAAGAGCTGCAGCTGAGCTAGCAAATGCTTCTAAATTCATTGATAAACTTCCTCAGGGGCTAGACACAATGGTTGGTGAGCATGGAACACAGCTCTCTGGAGGACAAAAGCAGAGAGTTGCCATAGCAAGAGCAATTCTGAAAGACCCGCGAATTCTACTTTTAGATGAAGCTACAAGTGCACTTGATGCAGAATCAGAACGAGTAGTACAAGAAGCATTGGACAGGATTATGGTCAACCGAACAACCATTATCGTTGCTCATCGTTTGAGTACAGTGAGGAATGCCGATATGATCGGTGTCATTCATCGTGGAAAGATGGTAGAAAAAGGCTCACACACTGAACTGCTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGTTTGCAAGAAGTGAATAAAGAGTCTGAGAATCAAGCTACAGATTCCCAAGACAGACCAGATGGCAGCATTGAATTCGGTAGACAGTCAAGTCAACGAATGTCATTCTTGCGATCCATAAGTCGTGGATCATCAGGACCAGGAAATAGCAGTCGTCACTCATTCTCCGTCTCCTTTGGCCTACCTACAGGACTTGGCCTCCCTGATAATGCTATTGCAGATGCTGAAGCCCCTCGCTCATCAGAACAGCCTCCAGAAGTTCCAATCCGCCGCCTTGCCTATCTCAACAAGCCAGAGATCCCTGTGCTGTTACTAGGAACCGTAGCTGCCATCGTCAATGGCACCATTCTCCCAATATTTGGTATACTCATTTCCAGTGTTATCAAAACATTTTATGAGCCCCCACACCAACTCAGGAAGGATTCAAATTTTTGGGCATTAATATTTTTAGTCCTGGGTGTGGTATCATTCCTAGCATTCCCAGCAAGGACATACTTATTCTCTGTGGCTGGCTGTAAGTTGATACAGAGGGTCAGATCAATGTGCTTTGAGAAGGTGGTTCACATGGAGGTGGGTTGGTTCGATCAGCCTGAGCATTCAAGTGGAGCAATTGGTGCAAGGCTCTCTGCAGATGCTGCAACCATTCGAGCTCTAGTTGGAGACGCGCTTGCTCAGGTTGTTCAGAATGCTGCATCAGCAATTGCAGGTTTGGCCATTGCCTTTGCAGCAAGTTGGCAGTTAGCATTTATCATCCTTGCTTTGATACCTTTGATAGGACTTAATGGATATGTCCAGATAAAGTTCCTTAAGGGATTCAGTGCTGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTGGCTAATGATGCAGTTGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAAGTGATGGATCTGTACAAAAAGAAATGTGAAGGCCCTATGAGAACAGGGATAAGGCAAGGGCTGGTCAGTGGGATAGGCTTTGGAGTTTCTTTCTTCCTGCTGTTCTGTGTCTATGCACTCTGTTTCTATGCAGGAGCCCGGCTTGTTGAAGCTGGAAAAACAACATTTGGAGATGTTTTTCGTGTTTTCTTTGCTCTGACCATGGCTACCGTTGGAATTTCTCAATCAAGTTCCTTCAGTCCTGATTCCAGCAAAGCCAAGTCTGCTGCAGCTTCCATCTTTACAATTATAGACAGGAAGTCCACAATCGACCCCAGCGACGAGTCTGGTACAAAATTAGAGAATGTGAAGGGCGAGATTGAGCTTCGGCACATAAGCTTTAAGTATCCAACTAGACCAGATATTCAGATTTTCAGAGACCTCAGCTTGACCATCCGTAGTGGCAAGACAGTGGCCTTGGTAGGAGAAAGTGGGAGTGGAAAATCAACAGTCATCGCCTTGCTGCAAAGATTTTATGATCCGGATTCAGGTCATATCACACTGGATGGTGTGGACATTCAAAGCCTCCAGTTGAGGTGGTTGAGGCAGCAGATGGGTCTAGTGAGCCAAGAACCGGTCTTGTTCAATGACACCATCCGTGCCAACATTGCATATGGAAAGGAAGGCCATACCACTGAAGCAGAAGTTATAGCTGCATCAGAGCTGGCAAACGCCCACAAGTTCATTAGCGGATTACAACAGGGGTATGACACCATGGTGGGAGAGAGAGGAATCCAACTATCAGGTGGGCAAAAGCAGAGAGTAGCCATTGCAAGAGCTATGGTGAAGAGCCCAAAGATACTGCTACTGGATGAGGCGACCAGTGCACTAGATGCTGAGTCTGAGCGGGTGGTACAAGATGCATTAGACCGAGTCATGGTGAACAGGACCACAGTGGTGGTAGCCCATCGGTTATCCACAATCAAGGGTGCTGATGTTATAGCCGTGGTGAAAAATGGAGTCATAGTTGAGAAGGGAAAGCATGAAACTCTGATAAACATCAAAGATGGGTTTTATGCCTCCTTAATAGCACTTCACATGAGCGCTTCCTCTTAA | 3432 | 0.4473 | MNKTAKRTQFALFILNMLLKPIRVFRFSFSNFVFVQVGKFIQLVSTFIGGFIIAFIKGWLLTLVMLSSIPLLVIAGGAMSLFLSKMATRGQNAYAKAATVVEQTIGSIRTVASFTGEKQAVTKYNQFLVNAYKSGVFEGLAAGLGLGTVMFIIFASYALAVWFGAKMILEKGYTGGTVLNVIIAVLTGSMSLGQASPCMSAFAAGQAAAFKMFQTIHRKPEIDVSDTKGKKLEDIQGEIELRDVYFSYPARPDEQIFSGFSLSIPSGTTAALVGQSGSGKSTVISLIERFYDPLAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFTSSIRDNIAYGKEGATIEEIRAAAELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTIIVAHRLSTVRNADMIGVIHRGKMVEKGSHTELLKDPEGAYSQLIRLQEVNKESENQATDSQDRPDGSIEFGRQSSQRMSFLRSISRGSSGPGNSSRHSFSVSFGLPTGLGLPDNAIADAEAPRSSEQPPEVPIRRLAYLNKPEIPVLLLGTVAAIVNGTILPIFGILISSVIKTFYEPPHQLRKDSNFWALIFLVLGVVSFLAFPARTYLFSVAGCKLIQRVRSMCFEKVVHMEVGWFDQPEHSSGAIGARLSADAATIRALVGDALAQVVQNAASAIAGLAIAFAASWQLAFIILALIPLIGLNGYVQIKFLKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMDLYKKKCEGPMRTGIRQGLVSGIGFGVSFFLLFCVYALCFYAGARLVEAGKTTFGDVFRVFFALTMATVGISQSSSFSPDSSKAKSAAASIFTIIDRKSTIDPSDESGTKLENVKGEIELRHISFKYPTRPDIQIFRDLSLTIRSGKTVALVGESGSGKSTVIALLQRFYDPDSGHITLDGVDIQSLQLRWLRQQMGLVSQEPVLFNDTIRANIAYGKEGHTTEAEVIAASELANAHKFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAMVKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKGADVIAVVKNGVIVEKGKHETLINIKDGFYASLIALHMSASS* | 1144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g0571 | 1143 | Gene3D | - | 889 | 1142 | IPR027417 | - | |
Vvi7g0571 | 1143 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 239 | 475 | IPR003439 | GO:0005524 | |
Vvi7g0571 | 1143 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 578 | 864 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi7g0571 | 1143 | FunFam | ABC transporter B family member 1 | 557 | 865 | - | - | |
Vvi7g0571 | 1143 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 899 | 1136 | IPR003439 | GO:0005524 | |
Vvi7g0571 | 1143 | CDD | ABC_MTABC3_MDL1_MDL2 | 239 | 477 | - | - | |
Vvi7g0571 | 1143 | ProSitePatterns | ABC transporters family signature. | 1039 | 1053 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi7g0571 | 1143 | ProSitePatterns | ABC transporters family signature. | 378 | 392 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi7g0571 | 1143 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 28 | 204 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi7g0571 | 1143 | FunFam | ABC transporter B family member 9 | 866 | 888 | - | - | |
Vvi7g0571 | 1143 | Gene3D | - | 237 | 490 | IPR027417 | - | |
Vvi7g0571 | 1143 | CDD | ABC_MTABC3_MDL1_MDL2 | 899 | 1135 | - | - | |
Vvi7g0571 | 1143 | Gene3D | ABC transporter type 1, transmembrane domain | 36 | 873 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi7g0571 | 1143 | PANTHER | ABC TRANSPORTER B FAMILY | 31 | 480 | IPR039421 | - | |
Vvi7g0571 | 1143 | FunFam | ABC transporter B family member 1 | 889 | 1139 | - | - | |
Vvi7g0571 | 1143 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 37 | 200 | - | - | |
Vvi7g0571 | 1143 | Pfam | ABC transporter | 259 | 406 | IPR003439 | GO:0005524 | |
Vvi7g0571 | 1143 | SUPERFAMILY | ABC transporter transmembrane region | 559 | 883 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi7g0571 | 1143 | MobiDBLite | consensus disorder prediction | 480 | 502 | - | - | |
Vvi7g0571 | 1143 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 889 | 1136 | IPR027417 | - | |
Vvi7g0571 | 1143 | SUPERFAMILY | ABC transporter transmembrane region | 30 | 221 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi7g0571 | 1143 | Coils | Coil | 473 | 493 | - | - | |
Vvi7g0571 | 1143 | FunFam | ABC transporter B family member 1 | 229 | 478 | - | - | |
Vvi7g0571 | 1143 | Pfam | ABC transporter transmembrane region | 30 | 190 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi7g0571 | 1143 | Pfam | ABC transporter transmembrane region | 577 | 849 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi7g0571 | 1143 | SMART | AAA_5 | 926 | 1119 | IPR003593 | GO:0016887 | |
Vvi7g0571 | 1143 | SMART | AAA_5 | 266 | 438 | IPR003593 | GO:0016887 | |
Vvi7g0571 | 1143 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 567 | 882 | - | - | |
Vvi7g0571 | 1143 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 230 | 477 | IPR027417 | - | |
Vvi7g0571 | 1143 | Pfam | ABC transporter | 918 | 1067 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g0571 | Vvi-Chr7 | 4974456 | 4979419 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g0571 | 556 | 1141 | Calmodulin-binding Proteins | AT2G36910 | 39.597 | 1.85e-133 | 436 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g0571 | K05658 | - | vvi:100267452 | 2062.73 |