Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0553 ATGTACGTAGAGATGGGCTGTCTAGCCATTGCCTTGGTTTCTTTCACAGTTATTTTTATTTCCATAATTTGGCAGATTTGCAGGATTCTGTTTTGGAGGCCTTATGTAGTGACTAGATGCTTTCGGAAACAAGGAATCAGAGGGCCTCCTTACTCAGTCCTTTCGGGCTCTCTGCATGAAATCGAGAGGCTGAAGAATGCAGCAAGAGGGAGCGTTCTGGAAACAAGTTCAAATGATATTATTCAGAGGGTTGTTCCTCACTACCATAGATGGTCCTTAGACTATGGAGATACGTTTCTGTATTGGTTTGGAACACAGCCAAGGATCTGCATTTCTGATCCAGAACTGGCCAAACACATCCTATCAAACAAATTTGGTTGCTTCATTAAACCCATGACAAGGCCTCTGCTAGAAAAAATGGCAGGGAGGGGACTAGGCCTGGTTAATGGAGCTGACTGGGTTAAACACAGGAGGATCACCAGTCCTGCCTTCACCTCAGGCAAGCTCAAGGTTATGATGAAGAGGATGGCAGAATGTACATTATCCATGCTTCATGAGTGGAAAAATCAGAGTTTTGTAGCTCATAACCAATGCAAGATGATAGAAGTGAATGGAGAATTTAGAAAGTTAACAGCTGATATAATTGCCCAGACTGCTTTTGGCACTAGCTATGTCCAAGGGAGGGAGGTCTTCGAGGCACAAAGAGAACTCCGCCAGTGTTGCAGAGCTTCCATTGCAGATATTCTGATCCCTTGGAGCCTATACCTTCCTACCCCAGAAAATCTTGGTATATGGAAGACAGAGAGGAGACTGAACAAGGCATTGAGGTCAATCATAGAGAGCAGATTGAATTCCCAGGTTTCCAGAAGCTCAGATTCAGTCCATGGAGATGATCTACTCGGGCTGATGATCGGAGAATCGGAAGCTGCTAAAACAAAACCAGGCCTCAAGTTGAGTATGAATGAGATCATAGAAGAATGCAAAATGTTCTTCTTTGCAGGGCAAGATACCACTTCCACTTTGCTAAGTTGGACTGTGTTCCTGTTAAGCTCACACCAAGAATGGCAGGACCGCCTCAGGCAAGAGGTGTTGAAGGAATGTAGGATGGGAATTCCTGATTCAGACATGCTGGCCAAGTTGAAACTGGTGAACATGGTTTTTTTGGAAGTTCTGAGACTGTATAGCCCAGTGATAACAACATTCAGGAAAGCATCCAAAGACATAAAATTTGGGAACCTGATAATCCCAAGAGATACATGCATATCTATTCCAGTAGTGAAGATACATCGGATGGAGAAATACTGGGGAGAAGATGCAAATGAGTTCAATCCTTTGAGGTTCTCTAATGGAGTCTCTGAAGCTGCAAAACACCCAAATGCACTAATTGCCTTTGGAATGGGCCCAAGAGCTTGTATTGGCAAAAAATTTGCAATGTTGGAGGCAAAAATAGTGATTGTCTTGATGCTTCAGAGGTTTTCTTTTTTCCTCTCCCCTGACTATAAACACACACCAATGGAAAACCTCACTCTTCAGCCACAATGTGGCATCCCAATTCTGATGGAACCTTTGCTCTTATAA 1578 0.4347 MYVEMGCLAIALVSFTVIFISIIWQICRILFWRPYVVTRCFRKQGIRGPPYSVLSGSLHEIERLKNAARGSVLETSSNDIIQRVVPHYHRWSLDYGDTFLYWFGTQPRICISDPELAKHILSNKFGCFIKPMTRPLLEKMAGRGLGLVNGADWVKHRRITSPAFTSGKLKVMMKRMAECTLSMLHEWKNQSFVAHNQCKMIEVNGEFRKLTADIIAQTAFGTSYVQGREVFEAQRELRQCCRASIADILIPWSLYLPTPENLGIWKTERRLNKALRSIIESRLNSQVSRSSDSVHGDDLLGLMIGESEAAKTKPGLKLSMNEIIEECKMFFFAGQDTTSTLLSWTVFLLSSHQEWQDRLRQEVLKECRMGIPDSDMLAKLKLVNMVFLEVLRLYSPVITTFRKASKDIKFGNLIIPRDTCISIPVVKIHRMEKYWGEDANEFNPLRFSNGVSEAAKHPNALIAFGMGPRACIGKKFAMLEAKIVIVLMLQRFSFFLSPDYKHTPMENLTLQPQCGIPILMEPLLL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0553 525 Gene3D Cytochrome P450 33 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 514 - -
Vvi7g0553 525 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 Pfam Cytochrome P450 71 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 SUPERFAMILY Cytochrome P450 40 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0553 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0553 Vvi-Chr7 4846663 4849252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0553 29 523 Cytochrome P450 AT2G46960 51.400 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0553 K20660 - vvi:100264193 1064.29