Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0527 ATGGCCACCATGGCTCTCTCATCTCCATTTGTAGGCAAGGTGGTTCCGTTGAACCCAGGCACAGAGTTCTCATCGAAGGTTCGCGGCGATGGTAGAATCTCAATGAGGAAGTCATTTGCGAAGCCATCTGGAAGCCCCTGGTATGGCCCTGACCGTGTTAAGTACCTGGGACCATTTTCTGGTGAGCCTCCATCCTACCTTACCGGTGAGTTCCCTGGTGACTATGGGTGGGACACTGCAGGACTATCAGCAGATCCCGAAACCTTTGCCAAGAACCGAGAGCTCGAGGTGATTCACTGCAGGTGGGCAATGCTTGGGGCTTTGGGATGTGTCTTCCCTGAGCTTCTCTCCAGAAATGGAGTCAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTGCTCAGATTTTCAGCGAGGGTGGTCTCGACTACCTTGGGAACCCGGGTCTAGTTCATGCTCAGAGCATCTTAGCCATATGGGCTTGCCAGGTTATCCTCATGGGTGCTGTTGAGGGGTACCGCATTGGAGGAGGACCTCTTGGTGAGGTGATTGACCCTCTGTACCCAGGTGGGAGCTTTGACCCATTGGGACTTGCTGATGATCCTGAGGCATTTGCTGAGCTTAAGGTGAAGGAAATCAAGAACGGGCGTCTTGCCATGTTCTCCATGTTTGGTTTCTTTGTGCAGGCTATTGTAACCGGCAAAGGACCTTTGGAGAACCTTGCTGACCATCTAGCCGACCCAGTGAACAACAACGCCTGGGCCTATGCCACCAACTTTGTGCCTGGGAAGTGA 792 0.5316 MATMALSSPFVGKVVPLNPGTEFSSKVRGDGRISMRKSFAKPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQSILAIWACQVILMGAVEGYRIGGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0527 263 FunFam Chlorophyll a-b binding protein, chloroplastic 54 256 - -
Vvi7g0527 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
Vvi7g0527 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Vvi7g0527 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Vvi7g0527 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 263 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0527 Vvi-Chr7 4605074 4605865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0527 2 263 Chloroplast and Mitochondria Gene Families AT1G29930 85.019 3.29e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0527 K08912 - vvi:100252066 548.125