Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0524 ATGGACGATAGCTGTGCCGTTTGCGCCGAGACTCTCGAATGGGTTTCGTACGGACCATGTGGCCATCGCGATGTGTGCTCGACTTGCGTGGCTCGTCTTCGCTTCATCTGCGACGATCGCCGTTGCTGCATCTGCAAAACCGAGTGCAACGTTGTCTTTGTCACGAAGGCCTTAGGAGATTATACAAGAATGGTTAATGATTTTTCAATCCTGCCAACCGAATCAAGGGAGGGTCAAGTGGGAATGTATTGGTATCATGAGGACACACAAGCATTTTTTGATGATGTGGACCACTACAAGATGATCAAGGCAATGTGCAGGCTTTCTTGCAGCGTATGTGACCAGATGGAGGAGCAATCAAATGATGGCTCAAAGAGAAGGCAAAAGTTTAGGAATATTGACCAGTTGAAGGGTCATTTATTCCATCGGCATAAATTGTTCATGTGCAGTTTGTGTTTGGAAGGAAGAAAAGTATTTATTTGTGAACAAAAGCTCTACAATAGAGCACAGTTGAATCAGCATATAAACACAGGTGACTCTGAGGTGGATGGAAATGAGGCTGAAAGAGGTGGCTTCATGGGGCATCCGATGTGTGACTTCTGTAGAAGCCCATTTTATGGAGATAATGAGCTGTACTCGCATATGTCCACGGAACATTATACCTGTCATATATGCCAAAGGCAGAACCCTGGACAATTTGAATACTATAAAAATTATGATGACCTAGAGATCCATTTCCGGAGAGACCATTTCTTATGTGAGGACGAAGCCTGCCTTGCAAAAAAGTTTGTCGTCTTTCAATCTGAAGCAGAAATGAAGAGGCATAATGCTATAGAACATGGAGGACGTATGTCTCGCTCTAAACGTAATGCTGCTCTTCAGATACCAACAAGTTTTCGCTATCGAAGAAGTACTGAACAAGATCAACGCCGTGGAAGAGGAAGGACATTTAATCGTGATTCCTCTGCTGATCAACTCTCCTTGGCCATTCAAGCTAGTTTGGAGACAGCTAATGCAAATGACACATATCATGATCCACCCCCATCATCATCATCCAGCACTCAGGCAGTTTCTGATCATTATGATAGCGATCCCATAATTCAGCCATTTGAATCGTTGGCTATGACAGATTCTGAATCTTCTTCGAGATATCGTCAAGCCTTGGGTCATAACCCAATGAATGTACCTCTTGTGGAGTCTTTCTTTCCTCCTCTCGCCACGGCACCCAGCAGCAGTCTACCAAAACCCAAACTTGACTCAGAAGGTTTGCCGAAAAATACCATGGCTGCACGTCTCCGCCGTCAAGGTAAGGCAAATGTTCTCCATTCAGGTCAGGGTTGGCCAGCCCCAAATCGTGGATCAGTCCCACTATCAAGTAGTTCAACTCAATCTAAGGTTGCAAATATTGCACCTGTGCCATCATCTAGTCTGGATCAGGTTAAGTCAGCAACTGGTAGTGGATCTGCTCCAAACAGCTATGCTAGTTTTGCTCAGGCTCGACCCACAACAGTGCATGGATTTGCATCATCTGGTTCTTCAAGTAACTCAGGCAGCATAAGTAGGATCAGCCACTCTGCATCAGCCCCAAATCTTGCTGATAGCAGATCTTTTGATCCTTCTATGTCTGATTTTCCTCCAGTTTCTGCGACACAAAAGCAAAAGTTGCCAACAATTACCCAGCCCGTGCTGAATGCAGAAGCTGTTCACACTGCAAACAAGTCTCTGGTGGAAAAGATCCGTGCTGCTCTTGAATTTGATGAAGACAAATACACCGCTTTTAAAGACATATCCGGGCAGTATCGGCAAGGTTCAATTGACACCGCAGTATATCTGGCTTATGTTCAGCAGTTTGGTTTGTCACATCTTGTTCTTGAATTGGCTAGACTCTGTCCTGATGCTCAGAAGCAGAAAGAACTTTTAGAGACCTATAATGCTAGTGTACGGAGCAGTGGTTTACAAGAAAATGGTTGGGGGCATAGCAATGTCCATTTTAAAGACAAAAAGATCTCCAAGAAAGGTAAAGGAAAACCTGTAGTTGTGGAGGACAGTAATGTGAAGGATACATTAGCAGATAACATCATTAACACAGTTAGGAACCTTCGGTCCACCTTCAAGCCTTCAGAAGAAGAGGTGGAGGTGTTGTCAAAGGATGGGTACCGTGGTGCAAAAGGCAAATCAAAGGGAGTGATTGATGAGCAACAGTCAGATCTGAGTTCTGCTAGAGAACCCTTACCAAAGCTGAGTGCCCAAAATGAGGTGCCATCAGCGGGTGGTGGATCTAATCAAAATTTAGGGGCTGTGAGTGGAGGAAGTCAGCGACGAAAGAAAGCATCAAAATTCCTCAGAGCCCGTCTGGGTGATGGTTCAGTGGGTGCACTTCTGAACTCCCAAGATCCTGACCCAGATCCAGATCCAGTGGAGGAAACATTAGATGCAAACATGAATCCGGCTGAAGGCTTACCAGTTCATGGTGTTTGGCGGAATGGTGGTGGTCAGAGACTTTTTAGCAATGGCCAGAAGAGATTCTAA 2529 0.4504 MDDSCAVCAETLEWVSYGPCGHRDVCSTCVARLRFICDDRRCCICKTECNVVFVTKALGDYTRMVNDFSILPTESREGQVGMYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDQMEEQSNDGSKRRQKFRNIDQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHINTGDSEVDGNEAERGGFMGHPMCDFCRSPFYGDNELYSHMSTEHYTCHICQRQNPGQFEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRRSTEQDQRRGRGRTFNRDSSADQLSLAIQASLETANANDTYHDPPPSSSSSTQAVSDHYDSDPIIQPFESLAMTDSESSSRYRQALGHNPMNVPLVESFFPPLATAPSSSLPKPKLDSEGLPKNTMAARLRRQGKANVLHSGQGWPAPNRGSVPLSSSSTQSKVANIAPVPSSSLDQVKSATGSGSAPNSYASFAQARPTTVHGFASSGSSSNSGSISRISHSASAPNLADSRSFDPSMSDFPPVSATQKQKLPTITQPVLNAEAVHTANKSLVEKIRAALEFDEDKYTAFKDISGQYRQGSIDTAVYLAYVQQFGLSHLVLELARLCPDAQKQKELLETYNASVRSSGLQENGWGHSNVHFKDKKISKKGKGKPVVVEDSNVKDTLADNIINTVRNLRSTFKPSEEEVEVLSKDGYRGAKGKSKGVIDEQQSDLSSAREPLPKLSAQNEVPSAGGGSNQNLGAVSGGSQRRKKASKFLRARLGDGSVGALLNSQDPDPDPDPVEETLDANMNPAEGLPVHGVWRNGGGQRLFSNGQKRF* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0524 842 MobiDBLite consensus disorder prediction 303 322 - -
Vvi7g0524 842 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 452 550 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 753 769 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 706 730 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 435 550 - -
Vvi7g0524 842 PANTHER ZINC FINGER PROTEIN 598 1 750 IPR044288 GO:0061630|GO:0072344
Vvi7g0524 842 CDD RING-HC_ZNF598 3 53 IPR041888 -
Vvi7g0524 842 SMART c2h2final6 220 250 IPR013087 -
Vvi7g0524 842 SMART c2h2final6 196 219 IPR013087 -
Vvi7g0524 842 SMART c2h2final6 251 280 IPR013087 -
Vvi7g0524 842 SMART c2h2final6 108 144 IPR013087 -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 706 776 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 731 745 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 303 318 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 788 842 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 339 361 - -
Vvi7g0524 842 MobiDBLite consensus disorder prediction 339 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0524 1 836 C2H2 Transcription Factor Family AT3G62240 53.542 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0524 K22381 - vvi:100262296 1628.99