Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0496 ATGGCCTCGAACACACGTCTCCAAATCATTATCTTCACCATCTCCCTATGCAACCTCTCTCTGATGTCCTCTTCTTCATGGAGGTCCCTAGATACACAGACAGATTACAGAAAATGGGTGTCATGGAACGTTGAAAACTATCGAAAGAAGACTGCCCTCCAACCACAATCCATCAATGAAACGCCCAGTGGTGGTGGGGGGAAAGCCCTGGACATAAAGTTGAGCAAGGCTGAGATGAACAAGGTGACAATGACTGTTAGCCAAGATGGCACTGCCGATTACACCACTATCTCTGACGCCCTTCACACCATTCCACTGTACAACACTAGAAGAGTGATACTTGTGATAAAGCCTGGTGTTTATAGGGAAAAGGTCACCGTCCCTAGAGCTTTGCCCTTTGTTACATTTCTAGGGGATGCTAGTGACCCGCCTACGATTACTGGAAACGACACTGCGTCGGTCATTGGAAGAAATGGGGTGCCACTGAAGACCTTCCAGAGTGCAACTGTCGGAGTCGATGCAAACTATTTTGTGGCCATCAACATCAAATTTGAGAACACAGCTCCCCATGTGATTGGATCGGCCGGAGGCCAAGCAGTGGCACTTCGCATCTCAGGGACAAAGGCTGCATTTTATAACTGTAGTTTTTATGGCTCTCAAGACACTCTTTATGACCACACGGGCCTTCACTATTTCAACAATTGCTTCATCCAAGGCTCTGTTGACTTCATTTTTGGCTATGGCAGGTCCCTCTATGAGAACTGCAGTTTAAACTCAGTAGCCAAGAAAGTGGCATCCCTCACGGCCCAAAAGCGCAGCACTTCCTCGATGGCAAGTGGGTTTTCCTTCAAAGACTGTGTGGTAACAGGGAGTGGCACGGTTTACCTTGGAAGAGCTTGGGGTGATTACTCGAGGGTTGTCTTCTCTTACACATTCATGGACAAGCTTGTCCTTCCCCAAGGATGGAGTGATTGGGGCAAGAAAAAGCTGGACTCGAGAGTGTATTATGGAGAGTATAAGTGCAGTGGACCGGGAGCCAACTTGACGGCAAGAGTGCCATGGGCACATATGATGACAGATGAAGAGGCTGAGCCTTTTCTAGCGACTCACTATGTGGATGGAGATACCTGGCTCATTAGTCCATAA 1146 0.4808 MASNTRLQIIIFTISLCNLSLMSSSSWRSLDTQTDYRKWVSWNVENYRKKTALQPQSINETPSGGGGKALDIKLSKAEMNKVTMTVSQDGTADYTTISDALHTIPLYNTRRVILVIKPGVYREKVTVPRALPFVTFLGDASDPPTITGNDTASVIGRNGVPLKTFQSATVGVDANYFVAINIKFENTAPHVIGSAGGQAVALRISGTKAAFYNCSFYGSQDTLYDHTGLHYFNNCFIQGSVDFIFGYGRSLYENCSLNSVAKKVASLTAQKRSTSSMASGFSFKDCVVTGSGTVYLGRAWGDYSRVVFSYTFMDKLVLPQGWSDWGKKKLDSRVYYGEYKCSGPGANLTARVPWAHMMTDEEAEPFLATHYVDGDTWLISP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0496 381 FunFam Pectinesterase 79 380 - -
Vvi7g0496 381 ProSitePatterns Pectinesterase signature 1. 108 127 IPR018040 -
Vvi7g0496 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 378 - -
Vvi7g0496 381 Pfam Pectinesterase 84 375 IPR000070 GO:0030599|GO:0042545
Vvi7g0496 381 SUPERFAMILY Pectin lyase-like 81 378 IPR011050 -
Vvi7g0496 381 ProSitePatterns Pectinesterase signature 2. 237 246 IPR033131 -
Vvi7g0496 381 Gene3D - 78 380 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0496 Vvi-Chr7 4380962 4382867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0496 84 378 Carbohydrate Esterase AT5G47500 48.148 1.10e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0496 K01051 - vvi:100265859 762.681