Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0481 ATGGAGAGTGGAACCGAGATTTTCAGTAAAGGTTCACTCGTGGAAGTCAGTAGCGACGAAGACGGCTTCAAAGGCGCATGGTATGTAGCCACGATTCTAGAGTCACCGCCCAAGTCCGCCTCCAAGAAGAGGTCCAGGGCTTTGGTGGAGTACCAGGACCTTCTGGTTGACGACGTTGGCTCCAAGCCGCTCACGGAGGTGGTCGACACTTCCTTCCTCAGGCCCCTACCGCCGCCGGAGGCCGACACCAACTTTTGCGTAAACGACATCGTTGATGCGTTTTACAGGGATGGGTGGTGGACTGGCGTGATCACTAGGATTTCGGAGGATTCGAAGTGCACTGTTTTCTTCCAGAACCCTCCCGACGAGATTCAGTTTGACCGGTCCGATTTGCGGGTGCATAAGGAGTGGGTGGACGGCAAGTGGATCAGACCCGAAAAGCAGAGAACGACAGGATTGATTTTTAGCCCAGGAGCAGCAGTAGAAGTGACCCTTAATGAACAAAGTTCACGTGATGCTTGGTTCCCTGCAATTGTTCGTCGAGAAATTGGGCTAGGCTCATATGTGGTGCAGTGCCAGAGCTTAAAAAATAGTGGTGAAGCTGGGGTTCTGGATGTAACTGTAGATAACCTTCATATTCGACCATCTCCTCCACGTTTGGAGGGCAGAAAATTCGGCCTCTTGGAGAAGGTGGATGCATTTTATGATTATGGTTGGTGGAATGGAATAGTTACCAAAGTTCTTACGGGTAGGAGGTATGTTGTCTTCTTCAAGCATACAAACATGGAAAAGGAGTTCATTCACTCGGACCTGAGGCCCCACATGGAGTGGGTTGATGGAAAATGGGTTGGTGCTACACAGGAAGTTTTAGGTACGACATATTCTGATGAACAGTTAGGGCTTGTCCTCAACAATTCAAACAACACATCTGTGGGCATGCAACTTGAAAGTTCAGGCACTGTAATAGATGATGCTGGAGATAAGATATCTCATTCTACAAGATTCGAGAAGGACCGGTTGGAGCAACCTGCTACATACCTTGAAAATTCAACTTCTGTCATGACTTCAAACAGGAAGAAAGTGAAGGAGACAACATCTGGTGATGATGCTACACCTTCACGGCCATCAAAGAAATTAAAAGAGGGAGATGTTGCAGATGCCCCGATATCTCATGCAGTAGGTCAGTTAAGGATGGCACCAATTGAAACATTGATTCAGGAAGTGCCATGTGGTTTTGCCAACCCAACCACAGGAGGAACTGGTTCTAATCAAACAGAGCAACCTGTGGCTGGCAATCAATCTTCTACAAAAACTGGTAGTGCTTCTCAGGGAATGAAAGTCGGAAATGAACAAAAAAGTAGTGGACTAGGCAATCAAACACCAAATTCTGTAAAAAGGAAGGGAAGACCTCCAAAATCGCAAGTTAAAATTGCACAACCTTTTCCAGCTGGTGAGGAGGTTAATACAGTTCAGAATGCTGAAGGAACTGTAGAAAAGGAGTATACAACAAATAATGTTGACATGGATATGGCTGTAGGATTACCATCTAATGCTGAGGAAGGCACAATAGATGAAAATCCTTCTGACCATCCTAATGAGGAATCTTTGAAGGTTATGAGGGATCAGAAAAGGCATTTTGATGCTACGGCAAGACACAAGAGCAAGGAGATAGGGAAAAAGGAAGAAGGCACGGTGAGTACTCAATTGAAGAGGAGAGGAAGGCCACCTAAGAAACTGGAGAATAGAAACCCAGAAGCTTCATCGGAAGGAAGAGCACCTAGAGTATCATTTAAAAGAAGCCCAAAAGATTCATCAGCTGGAAGAGCCCCCAAATTACCTGTTAAAAGAAGCCCCAGGACTTCAATGAGGGAGCCTAAATTGAAACGCCAAAGGGCTTCCGCTGTAGGAACCAAAATAAAAGGCCCCAAAGCTACATCTGAAGGATCTAACTTAAATAACCAAATGGAGTTGGAGGCAGGCCTTGATTTAAATAGCCTATATGCTTCAGCAGCAGGTAAGGATGATAATGAAGTTGGAGGGGTTGCCTATGAAATGGCCATAAAAGATTGTAAGATGAATGAGGTTGAATTACCTATGAGCACAGTGGTCGAGTCTTCAGCTAAGAGGGGTTCACAAACTGAAATTCCTGTTCGACATTCAAGGAGGGCATATAGGAAACGTACCACAAATCAGAATCTTCTTGGTAGTAGGCAGAAGAATGTAGAAGGCATCAAAATTAGAACGCCTCGAACAAGAAAACAAAAGCTTCCGGATGAATCAATTGGGCAAGCATTAAGCAAGCAATTGGTGAAGAGTTCATCGAAGAGGGGAAGAAGACGAAGCATAAACATAAATTCTGCGCCTCCAACTCAAGGCTCTCAAGACGCACTTGGAGAGAAAACAGCTCCACTTGCGGAGATAGACAGCAAAACAAAACAGGTTGAAATGGCTGTCTCTGGAGTGCACAGTGTGCCTGATGATCAACCTCTGAAAATGTGGTTTGAGGGAATGCACAGTCCAGGCGTGGCAGATAATTCAAAACTCTCCCCTGGTCAGACTGTGAACCAGTGGAATGAGGCAAGGGAAAGACCTAGTGAAGTAACACAATCTCCTAGAATTGATCCCACTGGAGAAATTATGCTGGACCTGAATCAAAGCCTCCCCTTTGTGAAAAGCTCCCCAATTTGGAACACACTTGAGACTCTGGAAGTATTCCAGAGGATGCCACAGAAACCACATTTTCGTCCACTGGAAAATTGTAAAGAGGAACGTCGGGAAGGCTTAGCCATTGGTAATATGGTGACCTTCTCCACCTTGATAGAGAAGGTAGCCAAACTCAGATTTGATGATCCTAGAAGCATCTTTGGTAGCAGCTTGGAAGCACTAGTGGAGCTGGAAATGCATGGTTTTGACACCAAGCCAGTGCAGAGTCGCATAAATGAGCTGGTCTTCATTAAAGATCAGCAAGAACAGCTGAAGGGCAGGACCAAAGAAGTCGAAAATCAGATCATGGAGCACACTCATGAGAAGACGAAAATTGACGAAGAAATATATGAGATAGACAAGAAGATGATTGAGCTACAAGAGAAGCGTGCACTGGCTGTGTCAAACAAGGAGAGCAAGGATTCAGAAATTGCAGCACTGCTGTCGAGTGTGGATGCCATGAATGAAAGCATCCAGAGTGCGAGGCAGGATTTTGAGAGGGTAGCTACTTCCCCATGGTAA 3225 0.4549 MESGTEIFSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSRALVEYQDLLVDDVGSKPLTEVVDTSFLRPLPPPEADTNFCVNDIVDAFYRDGWWTGVITRISEDSKCTVFFQNPPDEIQFDRSDLRVHKEWVDGKWIRPEKQRTTGLIFSPGAAVEVTLNEQSSRDAWFPAIVRREIGLGSYVVQCQSLKNSGEAGVLDVTVDNLHIRPSPPRLEGRKFGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKHTNMEKEFIHSDLRPHMEWVDGKWVGATQEVLGTTYSDEQLGLVLNNSNNTSVGMQLESSGTVIDDAGDKISHSTRFEKDRLEQPATYLENSTSVMTSNRKKVKETTSGDDATPSRPSKKLKEGDVADAPISHAVGQLRMAPIETLIQEVPCGFANPTTGGTGSNQTEQPVAGNQSSTKTGSASQGMKVGNEQKSSGLGNQTPNSVKRKGRPPKSQVKIAQPFPAGEEVNTVQNAEGTVEKEYTTNNVDMDMAVGLPSNAEEGTIDENPSDHPNEESLKVMRDQKRHFDATARHKSKEIGKKEEGTVSTQLKRRGRPPKKLENRNPEASSEGRAPRVSFKRSPKDSSAGRAPKLPVKRSPRTSMREPKLKRQRASAVGTKIKGPKATSEGSNLNNQMELEAGLDLNSLYASAAGKDDNEVGGVAYEMAIKDCKMNEVELPMSTVVESSAKRGSQTEIPVRHSRRAYRKRTTNQNLLGSRQKNVEGIKIRTPRTRKQKLPDESIGQALSKQLVKSSSKRGRRRSININSAPPTQGSQDALGEKTAPLAEIDSKTKQVEMAVSGVHSVPDDQPLKMWFEGMHSPGVADNSKLSPGQTVNQWNEARERPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFERVATSPW* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0481 1074 CDD Tudor_Agenet_AtDUF_rpt2_4 87 133 - -
Vvi7g0481 1074 CDD Tudor_Agenet_AtDUF_rpt1_3 8 78 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 517 652 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 523 568 - -
Vvi7g0481 1074 Pfam Agenet domain 90 145 IPR008395 -
Vvi7g0481 1074 Pfam Agenet domain 158 218 IPR008395 -
Vvi7g0481 1074 Pfam Agenet domain 11 78 IPR008395 -
Vvi7g0481 1074 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 148 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 413 467 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 361 385 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 349 385 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 743 757 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 412 482 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 704 797 - -
Vvi7g0481 1074 Coils Coil 989 1009 - -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 779 797 - -
Vvi7g0481 1074 Pfam Protein of unknown function (DUF724) 887 1073 IPR007930 -
Vvi7g0481 1074 CDD Tudor_Agenet_AtDUF_rpt2_4 227 273 - -
Vvi7g0481 1074 SMART agenet_At_2 83 139 IPR014002 -
Vvi7g0481 1074 SMART agenet_At_2 153 221 IPR014002 -
Vvi7g0481 1074 SMART agenet_At_2 223 279 IPR014002 -
Vvi7g0481 1074 SMART agenet_At_2 6 81 IPR014002 -
Vvi7g0481 1074 MobiDBLite consensus disorder prediction 617 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0481 Vvi-Chr7 4282787 4297037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0481 18 137 PHD Transcription Factor Family AT5G58610 34.752 2.69e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0481 - - vri:117918459 2043.85