Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0469 ATGGGTGCTCCTCCACAACCCCTCCTCATGTCCCTTGATTTGAAGGGCATGGTCCTAGAAACCAAGGACAGCTGCAAGCCAAGTGGGTCTTTGTGGAGGAAGGTTTTGGAGCCTAAAGTCAAGAGAAGATTGCAAAGGAGGAGACAAAGAATTTTGATGAAGAGAAGGGCCCATCTCCCAGATTCTAGAAGGCCCACAAGTGGGATCCAGAGAAGGGTGAGAACCCTAAAGAAGCTGGTTCCAAACGGTGACTCTATGGGCCTTGATGGGCTGTTCAGGGAGACAGCAGATTACATTTTGTCTTTACAAATGAGAGTGGAAGTGATGCAGATTATGGTTAAGGTATTGTCAGATTCTGATAAGTGA 366 0.4699 MGAPPQPLLMSLDLKGMVLETKDSCKPSGSLWRKVLEPKVKRRLQRRRQRILMKRRAHLPDSRRPTSGIQRRVRTLKKLVPNGDSMGLDGLFRETADYILSLQMRVEVMQIMVKVLSDSDK* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0469 121 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 32 116 IPR044660 GO:0006355
Vvi7g0469 121 CDD bHLH_AtIBH1_like 61 113 IPR044549 GO:0006355
Vvi7g0469 121 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0469 Vvi-Chr7 4190761 4191126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0469 49 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 56.164 2.65e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0469 - - vvi:100855136 228.409