Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0463 ATGCACATCAACAACACCCACATTTTGCTTTCTCTTCTTTGTTTGTCTCTTGCTTTAAATTTTCACAATGCGGTGAGCGCAGATTCATTGATCCTCAGCTGTGGCTCCGCCAGTGGTGGTACTGATGCTGATGGAAGAAAATGGGTATCAGATTCGGCTTACCTTGTTTCGGATGAATCGATTTCGGCCACAGCCCAATCCCAAGACCCTTCACTTCCTTCTCCAGTACCGTACATGTCTGCAAGGATTTTCTCAGCCGAGTCTTCGTATAAATTTTCGGTTAAGACCAATCAGCGTTACTGGCTTAGACTCCATTTTTACCCATCAACTTATAGCTCCCTAGATCCTGCAGATGCCTATTTCTCAGCTGTTGCAGGTGGTGTTACGCTCATGACCAATTTCAGTGCTTCAATCACAGCTCAAGCTCTTACACAGGCTTACATTGTCAGAGAATATTCTCTGGCTCCCATGGATTTCGAGATCCTCAATGTCACCTTCAAGCCTTCTGATCAGCATAAGGGATCTTACGCTTTTGTGAATGGAATCGAGCTGGTTCCAATCCCAGATTTGTTTGACAAGGCATCAATGGTGGGTTTTTCAGACCAATCTCTTGATGTCGGGACTGCCAATGTGCAGACAATGTTCAGATTAAATGTTGGTGGGCAGTACATTCCTGCGAGTAATGACTCGGGTCTTACCCGGACTTGGTATGATGATTCGCCATACTTGTATGGTGCTGCTTTTGGGGTCACCTCTGAGGCTTCTGATAAGCTGAAAATCCAGTATCAGGGTATGGAAGATTATGTAGCTCCAGTTGATGTGTATAGAACATCAAGATCAATGGGCCCAGATCCTAAACTCAACCAGAATTTCAATCTAACATGGGTGTTCCAGGTTGATGGGAACTTCACCTACCTTGTGAGGCTCCATTTCTGTGAGTTCATACTGAATAAGATCAATCAGAGAGTATTTGATATATACGTGAACAATCAAACTGCAATGGCATCAGCCGATGTCATCGCCTGGACAGGATCAAAGGCAGTTCCCACCTACAAAGATTACTCGGTATATGTTACAGATGGCACAGGCGATGAGGAGCTTTGGGTGGCTCTTCACCCGTCCATCGCGGTGAAGCCTGAATACTACGATTCGCTTCTGAATGGACTCGAGGTATTCAAGATCAGCAACGCCAATAAAAGCTTGGCTGGCCCCAACCCCACGCCATCAGACATGCTTGTTAAGGCCGAGGCAGCAAGGTCTTTTGCATCAAATACCAAGAGTAGTAATTCAGTCATCGGTGTATCTGCAGGTGGAATAGCTGCAGCAGGCCTAGCAGCTGCAGTATGCATAGTTCTGTACCAAAGGAAGAACAGACAGCCAGGGACGGACAGCCGCACGACAAGCTGGCTGCCACTTTACGGGAACTCCCATTCCACGGCGAGCAAATCTACGATTTCAGGCCGAAGCACTGCTAGTAGCCATGTCTCAACCATGGCAGCAAGTCTCTGTCGCCACTTCTCCTTGCCGGAGATAAAGCACGCTACAAAGAACTTCGATGAGAACCTTGTCATAGGAGTTGGAGGATTCGGGAAAGTTTACAAGGGTATCATAGATGGAGGGACCAAAGTGGCTATCAAACGGTCGAATCCATCATCAGAACAAGGAGTCAATGAGTTCCAGACCGAAATTGAGATGCTTTCAAAGCTGAGGCACAGGCATTTGGTCTCTCTGATAGGCTACTGTGAAGAGGACGGTGAAATGGCTTTGGTCTATGACTACATGGCGCATGGAACCTTGAGGGAGCATCTCTATAAGAGCAACAAGCCTCATCTGTCATGGAAACAAAGGCTGGAGATTTGTATTGGGGCTGCAAGGGGGCTTCACTACCTTCACACTGGGGCGAAGTACACCATCATTCACAGGGATGTGAAGACTACCAACATTCTTGTGGATGAGAAGTGGGTTGCCAAAGTTTCGGATTTCGGGCTTTCGAAAACAGGTCCTGATATCAATCAGAACCATGTTAGTACAGTGGTAAAGGGCAGCTTCGGGTACCTGGATCCAGAATATTTCCGCAGGCAACAACTGACTGAGAAATCTGATGTCTACTCATTTGGGGTTGTCCTCTTCGAGGTCTTGTGCGCAAGGCCCGCTCTCAATCCTAGCCTTCCAAAGGAACAAGTCAGTCTTGCAGACTGGGCTCTACATTGCCAGAAAAAGGGAATTCTGGAAGATATCATCGATCCCCATCTCAAGGGAACGATCAATCCAGAGTGCTTGAAGAAGTTTGCAGACACGGCTGAGAAGTGCTTGTCTGATCATGGGCTTGACAGACCCTCCATGGGTGATATCTTGTGGAACCTTGAGTTTGCTCTCCAGCTGCAGGAAAACCCTGATGGTGCAAAAGCAGTTTCAGAGCGTGAAAATCCTGAAGAATTCAACCACAATAATATCATGGGGATGCATCGAAACATGCTGAGTCTTGGAAGTGATGATTCTGACATGAACGAGGTATCAGATGACTTGAATGGTAGTGAAGTCTTCTCACAGATTGTCAAACCAAAAGGGCGATAA 2574 0.4681 MHINNTHILLSLLCLSLALNFHNAVSADSLILSCGSASGGTDADGRKWVSDSAYLVSDESISATAQSQDPSLPSPVPYMSARIFSAESSYKFSVKTNQRYWLRLHFYPSTYSSLDPADAYFSAVAGGVTLMTNFSASITAQALTQAYIVREYSLAPMDFEILNVTFKPSDQHKGSYAFVNGIELVPIPDLFDKASMVGFSDQSLDVGTANVQTMFRLNVGGQYIPASNDSGLTRTWYDDSPYLYGAAFGVTSEASDKLKIQYQGMEDYVAPVDVYRTSRSMGPDPKLNQNFNLTWVFQVDGNFTYLVRLHFCEFILNKINQRVFDIYVNNQTAMASADVIAWTGSKAVPTYKDYSVYVTDGTGDEELWVALHPSIAVKPEYYDSLLNGLEVFKISNANKSLAGPNPTPSDMLVKAEAARSFASNTKSSNSVIGVSAGGIAAAGLAAAVCIVLYQRKNRQPGTDSRTTSWLPLYGNSHSTASKSTISGRSTASSHVSTMAASLCRHFSLPEIKHATKNFDENLVIGVGGFGKVYKGIIDGGTKVAIKRSNPSSEQGVNEFQTEIEMLSKLRHRHLVSLIGYCEEDGEMALVYDYMAHGTLREHLYKSNKPHLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILVDEKWVAKVSDFGLSKTGPDINQNHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCQKKGILEDIIDPHLKGTINPECLKKFADTAEKCLSDHGLDRPSMGDILWNLEFALQLQENPDGAKAVSERENPEEFNHNNIMGMHRNMLSLGSDDSDMNEVSDDLNGSEVFSQIVKPKGR* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0463 857 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Vvi7g0463 857 FunFam FERONIA receptor-like kinase 209 395 - -
Vvi7g0463 857 PANTHER OS07G0166700 PROTEIN 502 795 IPR045272 GO:0004714|GO:0006468
Vvi7g0463 857 Gene3D - 209 395 - -
Vvi7g0463 857 Gene3D - 30 186 - -
Vvi7g0463 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Vvi7g0463 857 SUPERFAMILY Protein kinase-like (PK-like) 486 790 IPR011009 -
Vvi7g0463 857 FunFam FERONIA receptor-like kinase 29 188 - -
Vvi7g0463 857 CDD STKc_IRAK 524 789 - -
Vvi7g0463 857 FunFam Receptor-like protein kinase FERONIA 594 808 - -
Vvi7g0463 857 Gene3D Transferase(Phosphotransferase) domain 1 594 810 - -
Vvi7g0463 857 ProSiteProfiles Protein kinase domain profile. 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0463 857 Pfam Malectin-like domain 32 394 IPR024788 -
Vvi7g0463 857 FunFam receptor-like protein kinase FERONIA 480 593 - -
Vvi7g0463 857 Gene3D Phosphorylase Kinase; domain 1 477 593 - -
Vvi7g0463 857 Pfam Protein tyrosine and serine/threonine kinase 523 785 IPR001245 GO:0004672|GO:0006468
Vvi7g0463 857 SMART serkin_6 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0463 Vvi-Chr7 4127828 4130401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0463 28 857 Receptor kinase-like Gene Family AT3G51550 56.602 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi7g0463 Malectin_like 4.1e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0463 - - vvi:100265864 1695.63