Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0459 ATGTCGGAGTGCGCAGATTTATTAGCAGCTTCTAGCATCGCCGGAATTTTGAGAAAGGCAGAATGGTTGTTTCTGAGCTGGTTACTTATATTATGTTATATGATATCCATGGCCCATGCTGATTTACCTGATAATCAACTGGAAGCACCATTGGTGTCTCCAACTAGTGCGCCATTAGCTACACCTGCTCTTCCAGATCTGCCCTTGCCATCTAATTTGCCGCTATACCATAGACGAAAGCAGAAACATCCAATGCCAAGCCATGTGCCAAAACGAGTGCTAGCACCATCCCAACCTCCTGATTATGGTCCACTTGTGACTTCTGCTCACCCTCCTACAAGTTCACGCTTGTCAAAACCGTCAATGAAGAGGGGTGGATTGGTATCTCCTGGTACTGGCCTTGTACCTCCTCATTTGGAAGATATTGCTCCTATGCAGTCCAATGCTGGCCCCATTCCTGTGGGTTTAGCTCAGCCACCACTGTCTCCTTCAGACTCCAATTGTTGTGAACCAGACATGGTGCTGAAACAGGGGAGCCATGGTTGCCATTGTGTGTATCCTATAAAGGTCGACCTTGTCCTTTTGAATGTCTCACAGAACCCAAATTGGAAACTTTTTCTAGAAGAACTAGCCACCCAGCTTGGTTTACGAGTTTCTCAAATTGAGCTGATAAATTTCTATCTGCTCAGCTTATCAAGGCTAAATATTTCAATGGATATTATTCCACATACAGGGATCAGTTTCTCTGCAAGCGATGCATCTAAAATAAACTCTTCACTTGCTGCACATATGGTTCATCTAGACCCTACATCAGTAGGTGTGGGTGATTACAAACTTCTTAATGTAACCTGGTTTAAGCCCCCAGTGCCCTCTCCAGCTCCTCTTGTTGCTACCTCACCCATGGAAGCACCTGCTAATCAGTACTCAGCTTCTACCTCACATGTCGATTCAAACAAAAGGAAACACCCAAATTTGGTTCTTATTCTTGGTATCATTGCTGGCATCTTAACTGTTGCCATTATATGTGTGATTATGGTTTCTTTATGTGCATCCTGTCGTAAGAAGACAAAACCATCTCCAGAAGAAAATGTAAAGCCAAGTACTGCAGATCCAGTTCCAGTTGTAGGATCTCTTCCTCATCCAACAAGTACACGGTTTCTTGCATATGAAGAACTTAAGGAGGCAACGAACAATTTTGAGCCTGCTAGCATACTTGGTGAGGGTGGGTTTGGCAGAGTTTTCAAGGGTGTCTTAAGTGATGGTACAGCTGTGGCAATTAAGAGGCTTACTAGTGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTCGAGATGCTTAGCAGGTTGCATCACCGTAATCTTGTGAAACTTGTGGGTTACTATAGCAATCGTGACTCTTCACAAAATCTCCTTTGTTATGAGCTTGTCCCAAATGGAAGCTTAGAGGCCTGGCTCCATGGCCCTCTGGGAGTCAACTGTCCTTTGGATTGGGACACCCGAATGAAGATTGCTCTTGATGCTGCCAGAGGGCTTGCATACCTGCATGAGGATTCACAACCCTGTGTTATCCACAGAGATTTCAAGGCGTCAAATATATTGCTCGAGAACAACTTTCATGCCAAGGTTGCTGATTTTGGCCTAGCCAAAAAGGCACCTGAAGGCAGGGCAAATTACCTGTCTACTCGTGTGATGGGCACATTTGGGTATGTAGCCCCTGAGTATGCTATGACTGGACATCTACTAGTAAAAAGTGATGTTTACAGCTATGGAGTTGTCCTCCTTGAGTTGTTGACAGGGAGAAGGCCTGTGGAGATGTCACAACCATCTGGACAGGAGAACCTTGTTACTTGGGCCAGACCAATTCTTAGAGACAAGGATCGGCTTGAAGAGCTAGCTGATGAAAGGCTTGCTGGAAAGTATCCAAAGGAAGATTTTGTACGAGTTTGCACAATTGCAGCAGCTTGTGTTGCACCTGAAGCAAACCAACGGCCCACAATGGGAGAAGTGGTGCAGTCACTGAAAATGGTACAGCGTGTAATGGAATATCAGGATTCCATGCTAACTTCCTCCAATGCGAGGCCGAACCTGAGGCAGTCATCTACCACCTTTGAATCAGATGGGACATCATCAATTTTCTCTTCTGGCCCTTACTCTGGTCTTAGTGCATTTGATAATGACAATATCTCTCGGACGGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATAA 2232 0.4507 MSECADLLAASSIAGILRKAEWLFLSWLLILCYMISMAHADLPDNQLEAPLVSPTSAPLATPALPDLPLPSNLPLYHRRKQKHPMPSHVPKRVLAPSQPPDYGPLVTSAHPPTSSRLSKPSMKRGGLVSPGTGLVPPHLEDIAPMQSNAGPIPVGLAQPPLSPSDSNCCEPDMVLKQGSHGCHCVYPIKVDLVLLNVSQNPNWKLFLEELATQLGLRVSQIELINFYLLSLSRLNISMDIIPHTGISFSASDASKINSSLAAHMVHLDPTSVGVGDYKLLNVTWFKPPVPSPAPLVATSPMEAPANQYSASTSHVDSNKRKHPNLVLILGIIAGILTVAIICVIMVSLCASCRKKTKPSPEENVKPSTADPVPVVGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKKAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVEMSQPSGQENLVTWARPILRDKDRLEELADERLAGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVMEYQDSMLTSSNARPNLRQSSTTFESDGTSSIFSSGPYSGLSAFDNDNISRTAVFSEDLHEGR* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0459 743 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Vvi7g0459 743 FunFam Receptor-like serine/threonine-protein kinase ALE2 379 476 - -
Vvi7g0459 743 SUPERFAMILY Protein kinase-like (PK-like) 373 676 IPR011009 -
Vvi7g0459 743 ProSiteProfiles Protein kinase domain profile. 399 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0459 743 Pfam Protein tyrosine and serine/threonine kinase 403 674 IPR001245 GO:0004672|GO:0006468
Vvi7g0459 743 CDD STKc_IRAK 405 675 - -
Vvi7g0459 743 Gene3D Transferase(Phosphotransferase) domain 1 477 696 - -
Vvi7g0459 743 Gene3D Phosphorylase Kinase; domain 1 381 476 - -
Vvi7g0459 743 PANTHER OS01G0750732 PROTEIN 162 690 - -
Vvi7g0459 743 FunFam Receptor-like serine/threonine-protein kinase ALE2 477 693 - -
Vvi7g0459 743 MobiDBLite consensus disorder prediction 688 710 - -
Vvi7g0459 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Vvi7g0459 743 MobiDBLite consensus disorder prediction 80 127 - -
Vvi7g0459 743 MobiDBLite consensus disorder prediction 356 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0459 Vvi-Chr7 4073142 4078545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0459 25 743 Receptor kinase-like Gene Family AT4G02010 70.776 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vvi7g0459 PK_Tyr_Ser-Thr 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0459 - - vvi:100264089 1452.19