Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0458 ATGGAGCAAACCAAACACCTTCTACTCATCATCTCCATCTCCTCTCTTCTCTTATCCTTCTCTGCAGAAGCCATTTGCGTCCCCAAAAACACCACCCGTCAGGCTCATTCCCCAGCCCGGCTTCCCTCAATCCGATCACCACCACATGTCTCTTCCCCTCCCCGGCGGCCCGTTGCTTCCCATTCGACCCCATTCGACCCTGCCATCAAGGCAATATGTGAGAAAACCGACTATCCTTTTCTCTGCATGTCCTCCCTTGCTCCATTTCTAGCCAGCTCGAACAACCCGGCTGCACTCCTGGAGATGGCGATAAAGGCATCCGTGAACTACACCGAAGCCGCTCTAGCCAAAGCCATGCGCCTATCCTCCGACCCCTCCACATCGTCCATTACCAAGGCCTACATCGCAGACTGCCAGGAGAACTACAGCGACGCCATCGATAACTTCAACATCGCAGCCAACGCGATTTCCAGCGGCGATATTGGGTTGATGAACAGCATGCTTAGTGGGGCTATATCAGATTTTCAGACTTGTGATGACGGTTTCGCTGAGATGAATGAGCTCGATTCACCCTTCAAGGAAATAGACACGAACCTCTCTCACATGGCCAGCAACTGCCTGGCCATTGCTGCTTTGCTTCCTTGA 645 0.5302 MEQTKHLLLIISISSLLLSFSAEAICVPKNTTRQAHSPARLPSIRSPPHVSSPPRRPVASHSTPFDPAIKAICEKTDYPFLCMSSLAPFLASSNNPAALLEMAIKASVNYTEAALAKAMRLSSDPSTSSITKAYIADCQENYSDAIDNFNIAANAISSGDIGLMNSMLSGAISDFQTCDDGFAEMNELDSPFKEIDTNLSHMASNCLAIAALLP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0458 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 210 - -
Vvi7g0458 214 CDD PMEI-like_2 66 213 - -
Vvi7g0458 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 213 IPR035513 -
Vvi7g0458 214 MobiDBLite consensus disorder prediction 36 63 - -
Vvi7g0458 214 NCBIfam pectinesterase inhibitor domain 66 210 IPR006501 GO:0004857
Vvi7g0458 214 Pfam Plant invertase/pectin methylesterase inhibitor 68 209 IPR006501 GO:0004857
Vvi7g0458 214 SMART PMEI_2 64 209 IPR006501 GO:0004857
Vvi7g0458 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 213 IPR035513 -
Vvi7g0458 214 FunFam Invertase/pectin methylesterase inhibitor family protein 66 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0458 Vvi-Chr7 4071642 4072286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0458 68 209 Carbohydrate Esterase AT5G49180 27.152 3.86e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0458 - - vvi:104879796 373.629