Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0449 ATGGTCTCCAAATCGAGCGACTCCGCTTTGAGATTCAGAAAGTCAAGTGGAGAACAGGCAAGTGGCGAACCCTTGGTTACTTTATCGTCTAAAATAAATCACCTGAAAAAGCAGATTCAAGCAGAGAGAGTCGTTTCAATAAGAGAAAAACTTGAGAAGAATGGAAAGCAGCTACAAAATCATATTTCTCAGCTTGTGCCAGCAACATCAAAAAAGGATGTGTTGCTCATAGAGGGGAATGGGCCGGGAAGTATGCTTTCTTTGAGAGCTGAAAATCCTCTCTTCAAGTTTAGTGGTTTTCCTCAGGGATCAGGAGACAAAGACTATGCTAACAGCCAAGAAGTTGTATCCTCGACAAGTACCAAGCTTCCATATGTTGAGAAGATACCACCTTATACTAGTTGGATATTTTTGGACAGAAATCAAAGAATGGCTGAAGACCAGTCAGTGGTTGGGCGAAGACGGATTTACTATGATCAGCATGGTAGCGAAGCATTGATCTGTAGTGACAGTGAAGAAGATATTCCAGAACCTGAGGAAGAGAAGCATGAATTTTCTGAGAGCGAAGATCGTATTTTATGGATGGCCTTTAAAGAGCATGGGCTTAGTGAGGAAGTACTTGACCTTGTGAGCCAGTACATTGGAGGCAGCAATTCTGAAATTCAGGATCGGTGCAACATACTCAGGGAGAAGTATCAGGACAAACATGACAAAAGCTTAAAAGGTTCTGGGGAAAGTTGGTCTGAAAGGAGCATATTACTGGACAAGAGCCTTGGTGCAGCTTTAGATTCTTTTGATAATCTTTTTTGTCGCCGTTGCTTGGTATTTGACTGCCGACTGCATGGCTGTTCACAAAGTCCAATAAACCCTTTGAACAGTTCCGAGTTTGAAGAGGATGGGAAACCTTGCAGTGACCAGTGTTACCTTCGGTTAAGAGTTGTCAAAGACTTGCCAGAGGGTTCCGTTATTAGTTCCTTACAAAGGATAGAAACAACAGTGTCAGAAGAGAAGGACAGTATTCCAGCGTCCTCCAATGTTGAAGAGCCTAGTGGCAATGACAATACGGACATTTTACCTGATGAAAGATGCATTGCTGCAAAAACACTAGCTGTTACTTCAGAAACTGTTTTTAGTTCAGAAGTCGCTGCTGGAGGTTTAAACTCTGATGCATCTGTCATGGAAATGGGTCACTATGAAAGTCTGGGGAAGCGCAAGGTCTCAAAATGCACAAATACAGTGCTAGGGGACTCAACCTTGGTTTCTGATGATATCCAAGGCTCTTCTAGTAAGAAACAGAAGAAACTATCTGCCTTGGATGTAGTTATTGTGACTAGTGAAGGTCAACCAGTTTTGGATAACATTTCCAATGACAAAAATAAGTACCTGGAGATTGGCATACCCAATAAAAAAGAACTTCAAATGACCACCAACTGTGCCTTAAATGAATCTGCTGAACATATGCCAAATAAAGTTATTTGTCCTAGTCATGTTTCCTCTGATGAGACTGAGGACAATACTGGAGATGAAGTAGATGCTGTCAAGGAAACACCTGGATTGAAGCAGTCATCCAAGTCCTCAGGAGTTGAAGGGATCTTAAGCAGCTGTGAATGGAAACCTTTTGAAAAAGAACTATACTTGAAGGGAATAGAGATATATGGGAGGAACAGTTGCCTCATAGCCAGGAACCTACTTTCTGGCCTGAAGACTTGCATTGAAGTATCCAGTTATATGTATGATGATGGATCTGCAATGCTTCATAGATCTGCTGTTGTACCTAGTTCATTTTTGGAGGACAATGGGAGAGGCGATGCAGATTATACGGAGCAAGAGATGCCAACAAGATCACGACTATTCCGTAGAAGGGGCAGAACACGGAAGCTAAAGTATTCTTGGAAGTCAGCTGGCCATCCATCAATTTGGAAAAGAATTGCAGACGGGAAAAACCAGTCTTGTAAGCAGTACACACCATGCGGATGCCTGTCTATGTGTGGGAAGGAATGCCCCTGTCAAAGTAATGGAACTTGCTGTGAAAAATATTGTGGGTGCTCCAAAAGCTGCAAAAATCGGTTCAGGGGATGCCACTGTGCAAAGAGTCAATGCAGAAGTAGGCAATGCCCTTGCTTTGCTGCTGGTCGTGAATGTGACCCTGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGAGATGGTTCACTAGGTGAGCCTCCCAAACGAGGAGATGGTCAATGTGGGAACATGAGGCTCCTTTTAAGGCAACAGCAGAGGATCCTATTGGCAAAGTCTGATGTTGCTGGATGGGGAGCCTTTCTAAAGAACTCTGTCAACAAAAATGATTATCTTGGAGAATATACTGGTGAATTGATCTCCCACCGAGAAGCAGATAAGCGTGGGAAGATTTATGATCGTGCAAACTCATCCTTTCTTTTTGACTTGAACGATCAGTATGTACTTGATGCTTACCGCAAGGGAGATAAGCTGAAGTTTGCAAACCACTCATCAAACCCCAACTGCTATGCAAAGGTAATGCTGGTGGCCGGAGATCATCGAGTTGGCATCTTTGCTAAGGAGCATATAGAAGCTGGTGAGGAGCTCTTCTATGATTATCGTTATGGACCTGATCAAGCTCCTGCATGGGCTCGAAAACCTGAGGCTTCCAAAAGAGATGATTCAGCAGTATCTCAAGGTCGAGCAAAGAAACACCAGTCCCATTGA 2709 0.4326 MVSKSSDSALRFRKSSGEQASGEPLVTLSSKINHLKKQIQAERVVSIREKLEKNGKQLQNHISQLVPATSKKDVLLIEGNGPGSMLSLRAENPLFKFSGFPQGSGDKDYANSQEVVSSTSTKLPYVEKIPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEDIPEPEEEKHEFSESEDRILWMAFKEHGLSEEVLDLVSQYIGGSNSEIQDRCNILREKYQDKHDKSLKGSGESWSERSILLDKSLGAALDSFDNLFCRRCLVFDCRLHGCSQSPINPLNSSEFEEDGKPCSDQCYLRLRVVKDLPEGSVISSLQRIETTVSEEKDSIPASSNVEEPSGNDNTDILPDERCIAAKTLAVTSETVFSSEVAAGGLNSDASVMEMGHYESLGKRKVSKCTNTVLGDSTLVSDDIQGSSSKKQKKLSALDVVIVTSEGQPVLDNISNDKNKYLEIGIPNKKELQMTTNCALNESAEHMPNKVICPSHVSSDETEDNTGDEVDAVKETPGLKQSSKSSGVEGILSSCEWKPFEKELYLKGIEIYGRNSCLIARNLLSGLKTCIEVSSYMYDDGSAMLHRSAVVPSSFLEDNGRGDADYTEQEMPTRSRLFRRRGRTRKLKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCLSMCGKECPCQSNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEAGEELFYDYRYGPDQAPAWARKPEASKRDDSAVSQGRAKKHQSH* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0449 902 SMART CXC_2 688 725 IPR033467 -
Vvi7g0449 902 Pfam SET domain 764 867 IPR001214 GO:0005515
Vvi7g0449 902 MobiDBLite consensus disorder prediction 334 352 - -
Vvi7g0449 902 MobiDBLite consensus disorder prediction 334 357 - -
Vvi7g0449 902 Pfam CXC domain 692 723 IPR041355 -
Vvi7g0449 902 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 901 IPR045318 GO:0006338|GO:0042054
Vvi7g0449 902 SUPERFAMILY SET domain 654 871 IPR046341 -
Vvi7g0449 902 Gene3D SET domain 654 870 IPR046341 -
Vvi7g0449 902 FunFam Putative histone-lysine N-methyltransferase EZH2 654 870 - -
Vvi7g0449 902 ProSiteProfiles CXC domain profile. 640 739 IPR026489 -
Vvi7g0449 902 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 902 IPR025778 GO:0031519
Vvi7g0449 902 MobiDBLite consensus disorder prediction 876 902 - -
Vvi7g0449 902 SMART set_7 753 874 IPR001214 GO:0005515
Vvi7g0449 902 ProSiteProfiles SET domain profile. 753 868 IPR001214 GO:0005515
Vvi7g0449 902 MobiDBLite consensus disorder prediction 498 525 - -
Vvi7g0449 902 MobiDBLite consensus disorder prediction 1 23 - -
Vvi7g0449 902 CDD SET_EZH 753 869 - -
Vvi7g0449 902 MobiDBLite consensus disorder prediction 879 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0449 Vvi-Chr7 4010705 4025774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0449 742 871 C2H2 Transcription Factor Family AT2G23740 27.211 3.48e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vvi7g0449 SET 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0449 - - vvi:100255466 1772.67