Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0434 ATGGCGAAGTCGAAGAACCACACTGCCCACAACCAGTCCTACAAAGCCCACAAGAATGGAATCAAGAAACCCCGAAAGCACCGCCACACCTCCACCAAAGGGATGGATCCCAAGTTTTTGAGGAACCAAAGGTATGCGAGGAAGCATAACAAGAAGAGTGAAGGGTCTGCAACTGAGGAGGAGGCGTAG 189 0.5132 MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYARKHNKKSEGSATEEEA* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0434 62 Gene3D - 1 62 - -
Vvi7g0434 62 PANTHER 60S RIBOSOMAL PROTEIN L29 1 58 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vvi7g0434 62 MobiDBLite consensus disorder prediction 1 62 - -
Vvi7g0434 62 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vvi7g0434 62 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0434 Vvi-Chr7 3868535 3868851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0434 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 81.967 1.55e-31 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0434 K02905 - vvi:100243565 132.88