Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0417 ATGGTGGGAGGTGAAACGAAGATTGAATCTGCATTTTCCTGGGCGGATGAGGTTGAAAAAGAAGAGGAAGAAGCTAGAATTAGAACCCATGAAAGGCAGAGACCAAATCCTTTTGGCTCTGCAAGGCCTAGAGAAGTCGTTCTCCAAGAGAAAGGGATCGATTGGCGAAAACTCGACCAAGATCTTCACCAACCCTCCAATACACGATATGAAACTCCGGTGGAGAAGCCTCTTAAAGAAAACAACCCTGCATATTCGGCCCGGGCTGCCAACAAAAAACAGGAGATTTCCTCAGGCAGAAGTCTGCAATCAAAATCTGAAATTAGAGATCCGGGGTTTAACAGAAGGGAAGTTTCAGGGGGTTTTATGACTCCCCAGAAGCAGATGGGTGGAGTATTTGTTGGTCCCCCACCAAGATATCAAACTAGAAATGTCTTGGCCTGTTTATCAGAGGAGGCATATCACAACTCCTATAGATTGGATAGCGAGGATAGGAAGTTTCGGTATAGGAATCACATTGATTTTCTGTACAAGAATAGCAATGAGGCGGGAAGAGAGATGATGTTTCATGAACCCCAGACGACGCAATTTTATAACTCCAGCGGGCTGGGCATTGAGGAGCACATTCACCACTATGATGACCAGTTTGGCGCACATAACTCTCTTGTTGGATGGGAGAGGGAATACACAGAGTTCGATTTCGGTGTAAGAAGATCCAGTGGGGTAGAGTTGAGGCGTCCATGGATGGAGGCACTACATTGTGGGAGAAACTTGGGAAAATCAGTGGCTTGTGAGGAAAGGCGAGATGCAGACGCTGATTATAACAGAAGGAAGTTCATGAACCATAGTTCAGGATGTTGGCCACTGGTAAATGAAAGGAGAGAAGCCCTTCTCATTCATGAGAAAAGGCCACCATCTGTTGATGATCATGCAAGAAATGGTGGAGTTGGCAGAAGGCTGATGAACCCGCCTTCCAATGGAGCTGCACAGCAAAGGAGAGAAACCCTTCTCATTCATGAGAAAAGGCCACCATCTGTTGAAGATCATGCAAGAAATGGTGGAGTTGGCAGGAGGCTGATGAACCCGCCTTCCAATGGAGCTGCACAGCAAAGGAGAGAAACCCTTCTCATTCATGAGAAAAGGCCACCATATGTTGATGATCATGCAAGAAATGGTGGAGTTGGCAGGAGGCTGATGAACCCGCCTTCCAATGGAGCTGCACAGCAGAGACAGCAGCAGCAGCAACGGCAACATAACAATTCAGGCAGCAGAATGGTAAAGTTAACTAGAAGAGAGATGTACCAGGAAAAAAAGGAAAACGAGACAGAATGCCAGAGAGACGCTGGACGATTCGCACCCTCCATGGAAGAAGCTGGTGATGGTGAGAGAGCAGAAGGACAGTGCAATATGAAGAAGGGAGCAAATTCTGCTGGGAACTACAGGAAGAGAATGATGAAATCAGGACCTGAAAGCTACCACCAGCATGGGAAAAGAAGATGA 1500 0.4687 MVGGETKIESAFSWADEVEKEEEEARIRTHERQRPNPFGSARPREVVLQEKGIDWRKLDQDLHQPSNTRYETPVEKPLKENNPAYSARAANKKQEISSGRSLQSKSEIRDPGFNRREVSGGFMTPQKQMGGVFVGPPPRYQTRNVLACLSEEAYHNSYRLDSEDRKFRYRNHIDFLYKNSNEAGREMMFHEPQTTQFYNSSGLGIEEHIHHYDDQFGAHNSLVGWEREYTEFDFGVRRSSGVELRRPWMEALHCGRNLGKSVACEERRDADADYNRRKFMNHSSGCWPLVNERREALLIHEKRPPSVDDHARNGGVGRRLMNPPSNGAAQQRRETLLIHEKRPPSVEDHARNGGVGRRLMNPPSNGAAQQRRETLLIHEKRPPYVDDHARNGGVGRRLMNPPSNGAAQQRQQQQQRQHNNSGSRMVKLTRREMYQEKKENETECQRDAGRFAPSMEEAGDGERAEGQCNMKKGANSAGNYRKRMMKSGPESYHQHGKRR* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0417 499 MobiDBLite consensus disorder prediction 87 108 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 373 393 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 402 426 - -
Vvi7g0417 499 Pfam Plant specific eukaryotic initiation factor 4B 29 92 IPR010433 GO:0003743
Vvi7g0417 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 19 119 IPR010433 GO:0003743
Vvi7g0417 499 MobiDBLite consensus disorder prediction 334 354 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 305 499 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 12 38 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 47 64 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 1 136 - -
Vvi7g0417 499 MobiDBLite consensus disorder prediction 429 446 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0417 32 80 Eukaryotic Initiation Factors Gene Family AT3G26400 55.102 6.93e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0417 - - vvi:100243543 1013.06