Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0401 ATGGCTAGACTACTGTTCTTCTTCATTGTCATCATCATCTTCTTCTTTATCTCTCTTCCACTTTCACTCTCTCAATCAACAGCCGAAGAATCATGCAACGGTATCTTCTTGTCCTACAACTACACCTCAGGCCATCGCCTCCCGCCCACACTCATCCCCTCAGACCCATCCCAACAGCCTTACAGGTTCGAGTCCAATCTCGCCATCCTCAACAATGGCCTCCGCGAGCTCAAGTCATGGAGGGTCTATGTCGGGTTTGAGCACGGCGAGGTCTTGGTCTCTGCCTCTCATGCTGTGCTGGATGATGGGAGTTTGCTGCCGGCAAACGTTGGGAATGGCACGGTGTTCTCAGGGTTTCCGGAGAGGGACCTCAAGACTGCGGTTGAGACTGCGGGCTATTTGCCCCGGATGCGTGCTCAGGTCCAATTGGTGGGTACCCAGTTCGGTGTGACTGATCCGGATGTTCCCTTGCCCTCTACCATCACTCTTGCCAACGATGGATTCTCATGTCCTAACCCCACAAAGTTGAACTTTTGGATGCATGTGTGCTGCACCGAAGATTCAAGGTCTAACTTCACCACGGGAGAAGATTTGCAGCCACTCCAAAATGGGGATGTTACCATAATGTATGATGTGATCAGGTCATATGAGACTAATTACCGGGCTCAGGTTACTATCTCAAACCACAATCCTCTAGATCGACTTGATAATTGGAAATTAAGTTGGGAGTGGAAGAGGGATGAATTCATCTATGCCATGAAAGGAGCTTATCCATCTGTTGTTGATAGCACAGACTGCATTTTTGGCAAGCCAGGTGAGAGCTATAAGGACATGGACTTTTCCAATGCCTTGAATTGTGAGAGAAGGCCAACCATCATTGACCTTCCTCCAACAATGGTGAATAATTCGGACCTTGGGATGATTCCCTTCTGTTGTCGGAATGGTACTATTTTGCCTCCTACGATGGATCAAAGCAAGTCTGTGTCAGTTTTCCAAATGCAGGTTTTCAAAATGCCAACAGAGTTTAATAGAACTCAGCTCATTCCACCTCAGAACTGGAAAATCAGGGGAGAGGTGAATCAAGATTATCAGTGTGCTCCTCCTGTGAGGGTGAGCCAGAGCCAGTTCCCGAACCCAAGTGGGTTGCCCTCAGAATCAACAGCAATCGCTACTTGGCAAGTGGCTTGCAACAAAACAGAGTCCAAGGGGGCAATCCCAAGATGTTGTGTATCTTTTTCAGCATTTTTCAATGATTCTGTTGTGCCTTGCAACACTTGTGCTTGTGGCTGCAAAAGCAGCCCAAGCAACACTTGTAGCGCTTCTGCACAGGCTCTTCTTCTACCATCAGAGGCTCTTCTCGTTCCGTTCGAGAACAGAACCCGCAAAACTACTGAATTTGCTGAGTTACAACGCCGGGCACTGCCTAATCCATTACCCTGTGGGGATAACTGTGGAGTCAGCATCAACTGGCACTTGTTTACAGACTACGACAATGGCTGGACAGCTAGGATCACACTCTTCAATTGGGGTGAAACTGACTTTGTGGATTGGTTTGCTGCGTTGCAGTTTGACAAAGCAGTGCCTGGATTCCAAACCATGTACTCTTTCAATGGAAGTGCTCTTCCTGGTGTCCCGGCTAACAATACCATATTCATGCAGGGGAAACCGGGATTGAACTATCTTCTGGCGGAAAAAGATGGGAAAAAACCGAAGAAAGATCCTCGGGTTCCTGGTGCACAACAGTCTGTACTCTCATTTACAAAGAAAACAACACCTGGAATAAAGGTGGCTCGTGGGGATGGGTTTCCTACTAAAGTGTTCTTCAATGGTGAAGAGTGCTCGCTTCCCTCAATACTTCCAAGCAATGCTTATAGGATGATTGTAGCAACTAGATTTTTTAGTTTTCTTCTAGCTGCTGTAGCTCTGTTGTTTCTGCAGCAATAG 1944 0.4743 MARLLFFFIVIIIFFFISLPLSLSQSTAEESCNGIFLSYNYTSGHRLPPTLIPSDPSQQPYRFESNLAILNNGLRELKSWRVYVGFEHGEVLVSASHAVLDDGSLLPANVGNGTVFSGFPERDLKTAVETAGYLPRMRAQVQLVGTQFGVTDPDVPLPSTITLANDGFSCPNPTKLNFWMHVCCTEDSRSNFTTGEDLQPLQNGDVTIMYDVIRSYETNYRAQVTISNHNPLDRLDNWKLSWEWKRDEFIYAMKGAYPSVVDSTDCIFGKPGESYKDMDFSNALNCERRPTIIDLPPTMVNNSDLGMIPFCCRNGTILPPTMDQSKSVSVFQMQVFKMPTEFNRTQLIPPQNWKIRGEVNQDYQCAPPVRVSQSQFPNPSGLPSESTAIATWQVACNKTESKGAIPRCCVSFSAFFNDSVVPCNTCACGCKSSPSNTCSASAQALLLPSEALLVPFENRTRKTTEFAELQRRALPNPLPCGDNCGVSINWHLFTDYDNGWTARITLFNWGETDFVDWFAALQFDKAVPGFQTMYSFNGSALPGVPANNTIFMQGKPGLNYLLAEKDGKKPKKDPRVPGAQQSVLSFTKKTTPGIKVARGDGFPTKVFFNGEECSLPSILPSNAYRMIVATRFFSFLLAAVALLFLQQ* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0401 647 PANTHER COBRA-LIKE PROTEIN 7 25 645 - -
Vvi7g0401 647 Pfam COBRA-like protein 220 398 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0401 Vvi-Chr7 3584986 3587192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0401 16 620 COBRA Gene Family AT4G16120 62.158 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0401 - - vvi:100255470 1289.25