Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0395 ATGCCTGCAGAATCTCATGCTCCTAGCCCCAGGGGCCTCCTCTGTAATGCTGGCGCAGGCGCTGCGGCCGGAGTCATTGCGGCTACGTTTGTGTGCCCTTTAGATGTTATTAAGACGAGGTTTCAGGTTCATGGGCTGCCTCAGCTGGGTAATGGAAACATTAAAGGTAGTCTCATTGTTGGGAGTTTGGAACAAATATTTCAGAAGGAGGGATTGCGAGGCATGTATCGTGGGCTTTCTCCCACAGTCCTAGCATTGCTTCCAAACTGGGCAGTGTATTTTACAATCTATGAGCAGCTCAAGAGCTTTCTTTGTTCCAATGATGAGAATCATCAACTTTCAATTGGTGCCAACATGATAGCTGCCTGTGGTGCTGGGGCTGCAACAACCATTGCTACAAATCCCCTTTGGGTTGTGAAGACCAGACTTCAAACTCAAGGAATGAGAGCAGGTGTTGTACCATATAGCAGTACTCTTTCAGCTTTGAGGAGAATTGCTTATGAGGAGGGTATTCGTGGATTATACAGTGGGCTTGTGCCGGCATTGGCTGGTATCAGTCATGTGGCCATCCAATTCCCAACATATGAAAAAATCAAAATGTATTTGGCAAGTCGAGAAAACACTACAATGGATAAACTCGGTGCTCCTGATGTTGCTGTTGCCTCATCTGTCTCCAAAATATTTGCATCTACACTGACATATCCACATGAGGTGAATGAAACTGTGAAGGGAAGCATCTACAACTATAATGAGGAGAATTTTCTAATGAAATCCTATAAAAGCTTTTTTGAGTCTATTTAA 801 0.4444 MPAESHAPSPRGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLGNGNIKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTIYEQLKSFLCSNDENHQLSIGANMIAACGAGAATTIATNPLWVVKTRLQTQGMRAGVVPYSSTLSALRRIAYEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMYLASRENTTMDKLGAPDVAVASSVSKIFASTLTYPHEVNETVKGSIYNYNEENFLMKSYKSFFESI* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0395 266 Gene3D Mitochondrial carrier domain 111 264 IPR023395 -
Vvi7g0395 266 Gene3D Mitochondrial carrier domain 2 110 IPR023395 -
Vvi7g0395 266 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 240 IPR044712 GO:0006862|GO:0055085
Vvi7g0395 266 Pfam Mitochondrial carrier protein 14 106 IPR018108 -
Vvi7g0395 266 Pfam Mitochondrial carrier protein 112 203 IPR018108 -
Vvi7g0395 266 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Vvi7g0395 266 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 13 265 - -
Vvi7g0395 266 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Vvi7g0395 266 SUPERFAMILY Mitochondrial carrier 13 247 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0395 Vvi-Chr7 3539919 3548850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0395 1 238 Chloroplast and Mitochondria Gene Families AT2G47490 80.252 5.45e-128 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0395 K15115 - vvi:100258843 439.499