Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0394 ATGGCTGCCGCGGATGGAGCATTGCTGTTTTCGGTGGCGTCAGTGGTGGAGGATGTGCTCCAGCAGCATGGGACTCGCTCCGCAGATCTTGATTTGGAGTCCAGGAAAGCAGAGGAGGCCGCATCCCGAAGGTATGAAGCGGCAGGGTGGCTGAGAAAGATGGTTGGAGTTGTCGTAGGCAAAGATTTGCCAGCAGAGCCTTCTGAAGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGTCAATCCTTTGCACAGTTCTCAATAAGATCCAACCTGGAGCTGTGTCGAAGGTGGTAGAAAGTCCATGTGATTCTGCTCTTATCCCTGATGGAGCGGCCTTGTCAGCATATCAGTATTTTGAAAATGTGAGGAACTTCCTTGTAGCTGTGCAGGAGATGGGGCTTCCAACTTTTGAGGCATCCGACCTCGAACAAGGCGGAAAATCTGGAAGGGTTGTGAATTGTGTTCTGGCGCTTAAATCCTACAGCGAATGGAAACAAACTGGGGGAAATGGAATATGGAAATTTGGTGGAAATGTAAAACCTGCAGCAACTGGAAAATCTTTTGTAAGGAAAAATTCAGAGCCATTCACAAATTCCTTCTCTAGGAATTTGTCAGCTAGTGAAAATTCTCTTAACGCAATATCAATGGACCTAGACACTAATAAAATGCCTAGTTCTGGTTCCTTGAGTATGCTCGTTCGTTCAATTCTATTAGATAAGAAACCTGAAGAAGTTCCCATGTTGGTGGAATCTGTCCTAACTAAGGTTGTGGAGGAGTTTGAGCATCGCATTGCAAGCCAAAATGAGCTGAGGAAGACACCTTCAAAAGTTTTGGCTGTTTCCAACAGTAACAAGTCTCTTTTGAGAGCTGCTTCTAGTGATACTAAGATCGAAGACAAAAATGTTGCACTCATAAAGAAAGGGGAATGCTTTCGTAAATCCTTCGTCCCTGATGAGGAGTTGAAAGGCCGGATCCTGAAGCAACAAATGATATTTGACCAACAACAAAGAGATATTCAAGAGATGAAGCATGCCCTCCGAACCACAAAAGCTGGTATGCAGTTTATGCAAATGAAGTTTCATGAGGAGTTCCATAATCTTGGCACACATATTCATGGCCTAGCTCATGCGGCTTCTGGATATCACAGAGTTCTCGAGGAAAACAGAAAGCTATACAATCAAGTGCAAGATCTCAAGGGAAATATTCGGGTTTACTGTCGAGTGAGACCCTTCTTGTCTGGACAATTGAACTATCTAAGTACTGTGGATCACATGGAAGAAGGAAACATTACTATAAATTCTTCAAAGCATGGAAAAGGACGGAGATCCTTTAGCTTCAATAAAATCTTTGGACCAACTGCAACCCAAGAGGAAGTCTTTTCAGACACCCAGCCACTCATTCGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCGTATGGCCAAACAGGATCAGGGAAAACTTACACCATGACTGGACCCAAAGAGCTTACACGGCAAACTCAAGGTGTAAATTATAGAGCATTGAGTGACTTGTTTCTTCTCTCAGAACAAAGAAAGGACACCTTCCGCTATGATGTTTCTGTACAGATGATTGAGATTTACAATGAGCAAGTTAGGGATCTCCTTGTTACTGATGGCCTTAACAAAAGATATCCTTTACAAGTAGTATGTAACACATTAGAAATCCGTAACAGTTCTCAGACAGGACTCAATGTACCAGATGCAAACCTTGTTCCAGTGTCATCAACAGCTGACGTTATTGATCTGATGAACCTTGGACAAAGGAACCGAGTTGTGGGTGCAACAGCCCTCAATGACCGTAGTAGTCGCTCTCATAGTTGCTTGACTGTTCATGTTCAGGGAAGAGACTTGATGTCAGGAACTATTCTTCGTGGCTGTATGCATCTGGTTGATCTGGCCGGCAGTGAGAGAGTAGACAAATCTGAGGTCACTGGAGATAGACTAAAGGAGGCACAGCATATTAACAGATCTCTCTCTGCTCTAGGGGATGTCATCTCTTCCCTTGCCCAGAAGAATCCACATGTCCCTTACAGGAATAGTAAACTCACACAACTTCTTCAAGATTCACTTGGGGGGCAAGCCAAGACACTAATGTTTGTTCACATTAGCCCTGAACCGGATGCTGTTGGAGAAACAATTAGCACACTTAAATTTGCAGAGCGGGTTGCCACGGTAGAACTTGGTGCTGCTCGTGTAAACAAGGATAGTGCAGATGTGAAAGAGCTGAAAGAACAGATTGCTAGTCTTAAGGCAGCTCTGGCAAGGAAAGAGGGAGAACCAGAGGACATGCAACATTCATTTTCCAACAGCTCTGAAAGATACAGAACAAAAGCCAGTGATTTATCACCTTTTCATTCTAACAAGCAGGCGGGAGATATGTTAGATGATCAAAATAGCTGCAGGCAACCAATGGGGGATGTAGGCAACATTGAGGCACGCGGCAATTCCATGATGAGGCAAAAGAAGCAAAGCTTTGATCTTGAGGAGTTACTAGGGAACTCACCTCCTTGGCCTCCAGTCAGTAGTTCTGTGCAAAATTATGTGGAGGACGACAAAGACATGGGCTCTGGTCAGTGGGTAGATAAGGTTATGGTGAATAAGCAAGATGCTGTACCTAGAGTTGGAAACCCTTTAGGATGTTGGGAAACAGAGAATAGGAACTTGCCTGATGCTTTCTACCAAAAACTTATTTCAGATTCTTCAAAGCTATTCCCGGATCAATCATATAACATATTCATGGCAAACAATCGTTATGACATTGCTAATAATGATGATTTGGATGAGGATGCTGCCACCAGTGATTCTTCTGATGCTGATTTGCTTTGGCAATTCAATAATGCAAAAATAACTAGCATGACTAATGGGATTGAGCCAAAGATCAAGAAACCTAATACAAAGCCAGCAAATGGTCCAGAACTAAGGAATTTGAATTCTACTGTGGGCCCTTCACCATCACGGAAACCATCAAATGGGGTTGGGACCCGACTGCACAGGAACGGAAGGCACCCAGTTCCCGCAGATGGAAAGCGGAAAATTGGGAATAGAAAGTAG 3078 0.437 MAAADGALLFSVASVVEDVLQQHGTRSADLDLESRKAEEAASRRYEAAGWLRKMVGVVVGKDLPAEPSEEEFRLGLRSGSILCTVLNKIQPGAVSKVVESPCDSALIPDGAALSAYQYFENVRNFLVAVQEMGLPTFEASDLEQGGKSGRVVNCVLALKSYSEWKQTGGNGIWKFGGNVKPAATGKSFVRKNSEPFTNSFSRNLSASENSLNAISMDLDTNKMPSSGSLSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNSNKSLLRAASSDTKIEDKNVALIKKGECFRKSFVPDEELKGRILKQQMIFDQQQRDIQEMKHALRTTKAGMQFMQMKFHEEFHNLGTHIHGLAHAASGYHRVLEENRKLYNQVQDLKGNIRVYCRVRPFLSGQLNYLSTVDHMEEGNITINSSKHGKGRRSFSFNKIFGPTATQEEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTRQTQGVNYRALSDLFLLSEQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGLNKRYPLQVVCNTLEIRNSSQTGLNVPDANLVPVSSTADVIDLMNLGQRNRVVGATALNDRSSRSHSCLTVHVQGRDLMSGTILRGCMHLVDLAGSERVDKSEVTGDRLKEAQHINRSLSALGDVISSLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARKEGEPEDMQHSFSNSSERYRTKASDLSPFHSNKQAGDMLDDQNSCRQPMGDVGNIEARGNSMMRQKKQSFDLEELLGNSPPWPPVSSSVQNYVEDDKDMGSGQWVDKVMVNKQDAVPRVGNPLGCWETENRNLPDAFYQKLISDSSKLFPDQSYNIFMANNRYDIANNDDLDEDAATSDSSDADLLWQFNNAKITSMTNGIEPKIKKPNTKPANGPELRNLNSTVGPSPSRKPSNGVGTRLHRNGRHPVPADGKRKIGNRK* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0394 1025 PANTHER KINESIN-LIKE PROTEIN KLP-3 48 892 IPR027640 GO:0003777|GO:0007018
Vvi7g0394 1025 MobiDBLite consensus disorder prediction 979 1001 - -
Vvi7g0394 1025 MobiDBLite consensus disorder prediction 762 784 - -
Vvi7g0394 1025 SMART ch_5 43 161 IPR001715 GO:0005515
Vvi7g0394 1025 MobiDBLite consensus disorder prediction 1009 1025 - -
Vvi7g0394 1025 Pfam Calponin homology (CH) domain 42 163 IPR001715 GO:0005515
Vvi7g0394 1025 Gene3D - 27 181 IPR036872 -
Vvi7g0394 1025 SMART kinesin_4 399 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 ProSiteProfiles Kinesin motor domain profile. 401 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 SUPERFAMILY Calponin-homology domain, CH-domain 41 176 IPR036872 -
Vvi7g0394 1025 FunFam Kinesin-like protein KIN-14I isoform A 28 180 - -
Vvi7g0394 1025 Pfam Kinesin motor domain 407 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 Coils Coil 381 401 - -
Vvi7g0394 1025 ProSiteProfiles Calponin homology (CH) domain profile. 41 163 IPR001715 GO:0005515
Vvi7g0394 1025 MobiDBLite consensus disorder prediction 763 777 - -
Vvi7g0394 1025 PRINTS Kinesin heavy chain signature 604 621 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 PRINTS Kinesin heavy chain signature 684 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 PRINTS Kinesin heavy chain signature 635 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g0394 1025 FunFam Kinesin-like protein KIN-14I isoform A 396 776 - -
Vvi7g0394 1025 Coils Coil 741 768 - -
Vvi7g0394 1025 CDD CH_AtKIN14-like 43 160 - -
Vvi7g0394 1025 CDD KISc_C_terminal 399 736 - -
Vvi7g0394 1025 MobiDBLite consensus disorder prediction 964 1025 - -
Vvi7g0394 1025 Gene3D Kinesin motor domain 396 776 IPR036961 -
Vvi7g0394 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 767 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0394 Vvi-Chr7 3524878 3531114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0394 389 772 Calmodulin-binding Proteins AT5G65930 39.589 1.45e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0394 K10406 - vvi:100248567 1965.27