Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0384 ATGGCCAATTCCAGGCAAAACATTAGGAAGCTGGTCAAGGATGGTTTTGTCATCAGGAAGCCAACTAAAATTCATTCACGATCTCGTGCACGTCGAATGAAGGAGGCCAAGCGAAAGGGGCGTCACTCTGGATATGGTAAGCGTAAGGGTACGAGGGAGGCTAGGCTTCCAACCAAAATCCTGTGGATGAGGAGGATGCGTGTGCTTAGGCGCTTACTCCGCAAGTACAGGGAGTCGAAGAAGATTGACAAGCACATGTATCATGACATGTACATGAAGGTTAAGGGGAATGTGTTCAAGAACAAGCGTGTGTTGATGGAGAGCATTCACAAGTCAAAGGCTGAGAAGGCTAGAGAAAAGACTCTGTCTGACCAGTTTGAGGCTAAGAGGGCAAAGAATAAGGCAAGCAGGGAAAGAAAATTTGCTCGGAGGGAAGAACGTCTAGCCCAGGGACCAGCAGAGAGGGCACCACCACCAGCTGCTGTTGCATCTCAACCAACTGATGTTTCAAAGAAGTCCAAGAAGTGA 528 0.4848 MANSRQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPAERAPPPAAVASQPTDVSKKSKK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0384 175 MobiDBLite consensus disorder prediction 111 175 - -
Vvi7g0384 175 PANTHER 60S RIBOSOMAL PROTEIN L19 1 155 IPR039547 GO:0003723|GO:0003735|GO:0022625
Vvi7g0384 175 FunFam Ribosomal protein L19 24 158 - -
Vvi7g0384 175 Pfam Ribosomal protein L19e 1 112 IPR000196 GO:0003735|GO:0005840|GO:0006412
Vvi7g0384 175 MobiDBLite consensus disorder prediction 24 46 - -
Vvi7g0384 175 MobiDBLite consensus disorder prediction 24 52 - -
Vvi7g0384 175 MobiDBLite consensus disorder prediction 111 151 - -
Vvi7g0384 175 SMART Ribosomal_L19e_2 1 113 IPR000196 GO:0003735|GO:0005840|GO:0006412
Vvi7g0384 175 Gene3D - 24 156 - -
Vvi7g0384 175 Gene3D - 1 23 IPR015972 GO:0003735|GO:0005840|GO:0006412
Vvi7g0384 175 SUPERFAMILY Ribosomal protein L19 (L19e) 2 111 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0384 Vvi-Chr7 3456248 3458622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0384 1 175 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.795 1.64e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0384 K02885 - vvi:100246855 323.553