Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0376 ATGTCCATGCCATCAGTTTTGTGTAGAAGAGAGGGAGAAGGAGAAAGCAGACAGAGTGTGATAGTAGCGTTAGAGGGAAACAAGGTCTCCACTGCACCTCTCGCCAAGGCTTTGCGGGACTTGGTTGGCCCTACTGATGAGCTTTTGGTTCTTGCCATTCTAACTAATATAAAGACGGAAGCACTGCCAATATTACCCAGTACAGATTATAGTTCAAACATCAAATTCCTCCGCGAAGAAGTCAGTCAGAGAAAAGAGCATTACAGGAATATCTTCAGGCCTTTCTATGATAGATGCAAAAGCAGTGAAGTAAAGTTTCAGCTGAAGGTTTCAGCAGGCTGCCAACCAAGGGACATCATAATGGAGCAGGCAAAGAATTCTAAGACTACTTGGATTGTAATAGATAGGTGCTTTGCTAGAGACATGATTCCTAGATCGAATGACACAGATTGCAATATATCTTTGGTGGATGAAGACGAGGAGGCTATGATTCTTAAATACCTCGCTCTGAATGATGGATCAGGAACTTCAGCCGTTGATCAAGTAATATCCAATCCAGAACCTTCAGATCTAACAGAGGAACTGCCCTCACAAGAGGAACCACAGCTTTGTTCCTCACCAAATGTCGGAGCTGAGTTTCAACCTTTTTCTCCGTCTGCCCCTGAAAGTATGAGCACAGAAAGAGAAAATCCAACCATGTCTGAGCCATACGAGGAGTGTGAAATTATAGAGGACTTAGAAACACCGAACATCTCTTCACAAAGATTGTGCGACCTTATGCAAGTAAGACCGTTGCATCTGAGCGAGGAAATAGTTGCAGCTATCACAGGTGGGTTTATGACCAAGGTTAGCACCAACAGGAAAGAGAACTCCGAAACATATACCGGGTTTGTAGCCGATGATCAATCTCAAATTATGGTGAAAAGATTCAAGGGTGATTCTGGTGGCGTTCTTGAAGCAGAAAAAAAAGCAGCCTTGTACATTTATCATAAGAATATACTGGGGTTGAGAGGTTATCACAGTAGTAAGAATACCACTGTTCTGGTTTTCCCTTTCGCTAGAGGAAGAACATTGGACAACTATCTCTATGGCTCGAGGGGAAAAGAAGTGGACTTGACATTTCTTGATAAAATGGAGATAGCCATTGGAATTGCTAATGGTATCAGATATATGCATGAAGAATGTCCTCGAGGCCCCATTGCGCATGGCGACTTGAAGCCCCACAACATTATTCTGGGACATGATTTGAAGCCTCAGATCTCTGGCTTTGGGCGAGCAACCTGGCTGCTTCTTGAACAAACATTGCCGTTCACCAACAAGAGGTGCCCTGATAAGGATCCTTCAGACAACCCATCAACGGTTTTAGTAAAATCCGACATCCTCTCCTTTGGAGTTCTGCTCTTGAGGCTGTTTTGCCGAAGACACGTACCACAGGATGACAAAAATTTGATCAAGTGGGCTAGACCATTGCTGCTAGAAAGAGCATTCCATGAGTTATTGGGTGAAGATACTCAGGATTTGGACATGTATGGACTTTACAAGGTGATGACTGCAGCAACTCAATGCACAAAGACTACGCCATCTTCACGACCCTGTATGAGCGAGGTGATTTCCATTCTTAGAGGAGAAAGTTCTTGTGCTGTACAGTGTTCTCCAACCATAGAAAGCAGCATGTGA 1677 0.4383 MSMPSVLCRREGEGESRQSVIVALEGNKVSTAPLAKALRDLVGPTDELLVLAILTNIKTEALPILPSTDYSSNIKFLREEVSQRKEHYRNIFRPFYDRCKSSEVKFQLKVSAGCQPRDIIMEQAKNSKTTWIVIDRCFARDMIPRSNDTDCNISLVDEDEEAMILKYLALNDGSGTSAVDQVISNPEPSDLTEELPSQEEPQLCSSPNVGAEFQPFSPSAPESMSTERENPTMSEPYEECEIIEDLETPNISSQRLCDLMQVRPLHLSEEIVAAITGGFMTKVSTNRKENSETYTGFVADDQSQIMVKRFKGDSGGVLEAEKKAALYIYHKNILGLRGYHSSKNTTVLVFPFARGRTLDNYLYGSRGKEVDLTFLDKMEIAIGIANGIRYMHEECPRGPIAHGDLKPHNIILGHDLKPQISGFGRATWLLLEQTLPFTNKRCPDKDPSDNPSTVLVKSDILSFGVLLLRLFCRRHVPQDDKNLIKWARPLLLERAFHELLGEDTQDLDMYGLYKVMTAATQCTKTTPSSRPCMSEVISILRGESSCAVQCSPTIESSM* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0376 558 Gene3D Transferase(Phosphotransferase) domain 1 354 549 - -
Vvi7g0376 558 MobiDBLite consensus disorder prediction 210 231 - -
Vvi7g0376 558 SMART serkin_6 269 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0376 558 SUPERFAMILY Protein kinase-like (PK-like) 292 540 IPR011009 -
Vvi7g0376 558 MobiDBLite consensus disorder prediction 184 203 - -
Vvi7g0376 558 Gene3D Phosphorylase Kinase; domain 1 241 352 - -
Vvi7g0376 558 ProSiteProfiles Protein kinase domain profile. 269 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0376 558 PANTHER OS01G0253100 PROTEIN 241 542 - -
Vvi7g0376 558 Pfam Protein tyrosine and serine/threonine kinase 301 539 IPR001245 GO:0004672|GO:0006468
Vvi7g0376 558 MobiDBLite consensus disorder prediction 210 234 - -
Vvi7g0376 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0376 Vvi-Chr7 3397123 3400140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0376 276 544 Receptor kinase-like Gene Family AT1G60800 28.920 3.74e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vvi7g0376 PK_Tyr_Ser-Thr 7.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0376 - - vvi:100248688 1087.4