Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g0376 | ATGTCCATGCCATCAGTTTTGTGTAGAAGAGAGGGAGAAGGAGAAAGCAGACAGAGTGTGATAGTAGCGTTAGAGGGAAACAAGGTCTCCACTGCACCTCTCGCCAAGGCTTTGCGGGACTTGGTTGGCCCTACTGATGAGCTTTTGGTTCTTGCCATTCTAACTAATATAAAGACGGAAGCACTGCCAATATTACCCAGTACAGATTATAGTTCAAACATCAAATTCCTCCGCGAAGAAGTCAGTCAGAGAAAAGAGCATTACAGGAATATCTTCAGGCCTTTCTATGATAGATGCAAAAGCAGTGAAGTAAAGTTTCAGCTGAAGGTTTCAGCAGGCTGCCAACCAAGGGACATCATAATGGAGCAGGCAAAGAATTCTAAGACTACTTGGATTGTAATAGATAGGTGCTTTGCTAGAGACATGATTCCTAGATCGAATGACACAGATTGCAATATATCTTTGGTGGATGAAGACGAGGAGGCTATGATTCTTAAATACCTCGCTCTGAATGATGGATCAGGAACTTCAGCCGTTGATCAAGTAATATCCAATCCAGAACCTTCAGATCTAACAGAGGAACTGCCCTCACAAGAGGAACCACAGCTTTGTTCCTCACCAAATGTCGGAGCTGAGTTTCAACCTTTTTCTCCGTCTGCCCCTGAAAGTATGAGCACAGAAAGAGAAAATCCAACCATGTCTGAGCCATACGAGGAGTGTGAAATTATAGAGGACTTAGAAACACCGAACATCTCTTCACAAAGATTGTGCGACCTTATGCAAGTAAGACCGTTGCATCTGAGCGAGGAAATAGTTGCAGCTATCACAGGTGGGTTTATGACCAAGGTTAGCACCAACAGGAAAGAGAACTCCGAAACATATACCGGGTTTGTAGCCGATGATCAATCTCAAATTATGGTGAAAAGATTCAAGGGTGATTCTGGTGGCGTTCTTGAAGCAGAAAAAAAAGCAGCCTTGTACATTTATCATAAGAATATACTGGGGTTGAGAGGTTATCACAGTAGTAAGAATACCACTGTTCTGGTTTTCCCTTTCGCTAGAGGAAGAACATTGGACAACTATCTCTATGGCTCGAGGGGAAAAGAAGTGGACTTGACATTTCTTGATAAAATGGAGATAGCCATTGGAATTGCTAATGGTATCAGATATATGCATGAAGAATGTCCTCGAGGCCCCATTGCGCATGGCGACTTGAAGCCCCACAACATTATTCTGGGACATGATTTGAAGCCTCAGATCTCTGGCTTTGGGCGAGCAACCTGGCTGCTTCTTGAACAAACATTGCCGTTCACCAACAAGAGGTGCCCTGATAAGGATCCTTCAGACAACCCATCAACGGTTTTAGTAAAATCCGACATCCTCTCCTTTGGAGTTCTGCTCTTGAGGCTGTTTTGCCGAAGACACGTACCACAGGATGACAAAAATTTGATCAAGTGGGCTAGACCATTGCTGCTAGAAAGAGCATTCCATGAGTTATTGGGTGAAGATACTCAGGATTTGGACATGTATGGACTTTACAAGGTGATGACTGCAGCAACTCAATGCACAAAGACTACGCCATCTTCACGACCCTGTATGAGCGAGGTGATTTCCATTCTTAGAGGAGAAAGTTCTTGTGCTGTACAGTGTTCTCCAACCATAGAAAGCAGCATGTGA | 1677 | 0.4383 | MSMPSVLCRREGEGESRQSVIVALEGNKVSTAPLAKALRDLVGPTDELLVLAILTNIKTEALPILPSTDYSSNIKFLREEVSQRKEHYRNIFRPFYDRCKSSEVKFQLKVSAGCQPRDIIMEQAKNSKTTWIVIDRCFARDMIPRSNDTDCNISLVDEDEEAMILKYLALNDGSGTSAVDQVISNPEPSDLTEELPSQEEPQLCSSPNVGAEFQPFSPSAPESMSTERENPTMSEPYEECEIIEDLETPNISSQRLCDLMQVRPLHLSEEIVAAITGGFMTKVSTNRKENSETYTGFVADDQSQIMVKRFKGDSGGVLEAEKKAALYIYHKNILGLRGYHSSKNTTVLVFPFARGRTLDNYLYGSRGKEVDLTFLDKMEIAIGIANGIRYMHEECPRGPIAHGDLKPHNIILGHDLKPQISGFGRATWLLLEQTLPFTNKRCPDKDPSDNPSTVLVKSDILSFGVLLLRLFCRRHVPQDDKNLIKWARPLLLERAFHELLGEDTQDLDMYGLYKVMTAATQCTKTTPSSRPCMSEVISILRGESSCAVQCSPTIESSM* | 559 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g0376 | 558 | Gene3D | Transferase(Phosphotransferase) domain 1 | 354 | 549 | - | - | |
Vvi7g0376 | 558 | MobiDBLite | consensus disorder prediction | 210 | 231 | - | - | |
Vvi7g0376 | 558 | SMART | serkin_6 | 269 | 539 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g0376 | 558 | SUPERFAMILY | Protein kinase-like (PK-like) | 292 | 540 | IPR011009 | - | |
Vvi7g0376 | 558 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
Vvi7g0376 | 558 | Gene3D | Phosphorylase Kinase; domain 1 | 241 | 352 | - | - | |
Vvi7g0376 | 558 | ProSiteProfiles | Protein kinase domain profile. | 269 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g0376 | 558 | PANTHER | OS01G0253100 PROTEIN | 241 | 542 | - | - | |
Vvi7g0376 | 558 | Pfam | Protein tyrosine and serine/threonine kinase | 301 | 539 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi7g0376 | 558 | MobiDBLite | consensus disorder prediction | 210 | 234 | - | - | |
Vvi7g0376 | 558 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 400 | 412 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g0376 | Vvi-Chr7 | 3397123 | 3400140 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g0376 | 276 | 544 | Receptor kinase-like Gene Family | AT1G60800 | 28.920 | 3.74e-23 | 101 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vvi7g0376 | PK_Tyr_Ser-Thr | 7.3e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g0376 | - | - | vvi:100248688 | 1087.4 |