Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0368 ATGGGCATCGATCTCGTCGCCGGCGGCAAGAGCAAGAGGACCAAGCGAACGGCCCCCAAGTCCGATGATATTTACCTCAAACTCCTCGTCAAGCTGTACCGATTTTTGGTGCGGAGGACTGGGAGCAAATTCAATGCGGTGATATTGAAGCGGCTCTTCATGAGCAAGGTCAATAAGCCGCCTTTGTCACTTTCCCGTTTGGTTCGTTACATGGACGGAAAGGAGGGTAAGATTGCTGTGGTTGTTGGAACTGTTACCGATGATCTCCGAGTGTACGAAGTCCCTTGTCTGAAAGTGACTGCCCTGAGGTTCACAGAGAGAGCAAGGGCAAGGATTGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTGGCTCTCAGAGCTCCTCTTGGGCAGAACACGGTTCTGCTCAGAGGTCCCAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGCAAGGCTCCTGGTGTGCCACACAGCCACACCAAACCTTATGTACGGTCAAAGGGACGGAAATTTGAGAGGGCCAGAGGAAGAAGGAACAGCAGAGGTTTCAGGGTCTGA 564 0.5213 MGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEVPCLKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0368 187 MobiDBLite consensus disorder prediction 152 187 - -
Vvi7g0368 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Vvi7g0368 187 Gene3D - 1 187 - -
Vvi7g0368 187 FunFam 60S ribosomal protein L18 1 187 - -
Vvi7g0368 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Vvi7g0368 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Vvi7g0368 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0368 Vvi-Chr7 3341832 3344839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0368 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 81.720 1.20e-107 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0368 K02883 - vvi:100250430 345.125