Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0347 ATGGCAGGCCTCCATGTTTCTCTGTCATTCTTGGTCCTCGCTGGGCTGATGAATCTGGGGATGTTATCAGCCTCTGAAAATGGGAACAATTACCTTAGAGAAGCATGCAGTGTGACAAGGTATCGTGATCTTTGTATCCATTCACTGGCATCATTTTCCCACACTGCCAAACGAAGTCCTAGCAGGTGGGCAAGGGCAGGGGTCTCAGTTACGATAGGTGAAGCCAAGCATGTAGCTCAGTACTTGGTGAAGCTAAGGAAACGAGGCACGATGAGGGGAAGAAACGGAGCTGCCCTCTCGGACTGTATAGAGTGTTTTCAGGACGCCATTGACAATCTTCTCAACTCACTGGGGATGCTAAGAAAGCTTAGCAGCAAGGCCTTTGACAGGCAAATGAGTGATGTGAGTACTTGGATGAGCGCTGTGCTCACAGATGAGGACACTTGCTTGGATGGCTTCGATGGCAGTAAGGGGAAACGGGCTAAGTTGATTCGAAATCAGGTCCAGAATGTCACTTACATTACTAGTAATGCACTGGCCCTTGTTAACAAACTTGCAACTGCTGGTGCAGGAAGCCTAAATATTCCGTAG 591 0.4839 MAGLHVSLSFLVLAGLMNLGMLSASENGNNYLREACSVTRYRDLCIHSLASFSHTAKRSPSRWARAGVSVTIGEAKHVAQYLVKLRKRGTMRGRNGAALSDCIECFQDAIDNLLNSLGMLRKLSSKAFDRQMSDVSTWMSAVLTDEDTCLDGFDGSKGKRAKLIRNQVQNVTYITSNALALVNKLATAGAGSLNIP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0347 196 SMART PMEI_2 27 181 IPR006501 GO:0004857
Vvi7g0347 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 187 IPR035513 -
Vvi7g0347 196 FunFam Pectinesterase inhibitor 3 27 186 - -
Vvi7g0347 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 185 IPR035513 -
Vvi7g0347 196 CDD PMEI-like_3 35 187 - -
Vvi7g0347 196 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Vvi7g0347 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 181 - -
Vvi7g0347 196 NCBIfam pectinesterase inhibitor domain 8 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0347 Vvi-Chr7 3194163 3194753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0347 32 185 Carbohydrate Esterase AT3G14310 32.704 2.19e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0347 - - vvi:100263994 386.726