Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g0347 | ATGGCAGGCCTCCATGTTTCTCTGTCATTCTTGGTCCTCGCTGGGCTGATGAATCTGGGGATGTTATCAGCCTCTGAAAATGGGAACAATTACCTTAGAGAAGCATGCAGTGTGACAAGGTATCGTGATCTTTGTATCCATTCACTGGCATCATTTTCCCACACTGCCAAACGAAGTCCTAGCAGGTGGGCAAGGGCAGGGGTCTCAGTTACGATAGGTGAAGCCAAGCATGTAGCTCAGTACTTGGTGAAGCTAAGGAAACGAGGCACGATGAGGGGAAGAAACGGAGCTGCCCTCTCGGACTGTATAGAGTGTTTTCAGGACGCCATTGACAATCTTCTCAACTCACTGGGGATGCTAAGAAAGCTTAGCAGCAAGGCCTTTGACAGGCAAATGAGTGATGTGAGTACTTGGATGAGCGCTGTGCTCACAGATGAGGACACTTGCTTGGATGGCTTCGATGGCAGTAAGGGGAAACGGGCTAAGTTGATTCGAAATCAGGTCCAGAATGTCACTTACATTACTAGTAATGCACTGGCCCTTGTTAACAAACTTGCAACTGCTGGTGCAGGAAGCCTAAATATTCCGTAG | 591 | 0.4839 | MAGLHVSLSFLVLAGLMNLGMLSASENGNNYLREACSVTRYRDLCIHSLASFSHTAKRSPSRWARAGVSVTIGEAKHVAQYLVKLRKRGTMRGRNGAALSDCIECFQDAIDNLLNSLGMLRKLSSKAFDRQMSDVSTWMSAVLTDEDTCLDGFDGSKGKRAKLIRNQVQNVTYITSNALALVNKLATAGAGSLNIP* | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g0347 | 196 | SMART | PMEI_2 | 27 | 181 | IPR006501 | GO:0004857 | |
Vvi7g0347 | 196 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 28 | 187 | IPR035513 | - | |
Vvi7g0347 | 196 | FunFam | Pectinesterase inhibitor 3 | 27 | 186 | - | - | |
Vvi7g0347 | 196 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 29 | 185 | IPR035513 | - | |
Vvi7g0347 | 196 | CDD | PMEI-like_3 | 35 | 187 | - | - | |
Vvi7g0347 | 196 | Pfam | Plant invertase/pectin methylesterase inhibitor | 31 | 181 | IPR006501 | GO:0004857 | |
Vvi7g0347 | 196 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 181 | - | - | |
Vvi7g0347 | 196 | NCBIfam | pectinesterase inhibitor domain | 8 | 185 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g0347 | Vvi-Chr7 | 3194163 | 3194753 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g0347 | 32 | 185 | Carbohydrate Esterase | AT3G14310 | 32.704 | 2.19e-18 | 80.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g0347 | - | - | vvi:100263994 | 386.726 |