Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0326 ATGTCTTCTGCTTCTTGGATCACCACCCTCTCATGTTCCAGTTCAGTGATAGCATCCTCAGGGGAAACACCTTTTTCATTGATACTTCAATGGCTGAGATTCATCTTCCTCTCTCCATGTCCTCAGAGAGCTCTTTTATCTTCCATTGATCTCCTCTTCTTGCTCACCCTCATTGCATTTTCCGTTCAAAAGCTCTATTCTAGATTCATCTCCAATGGCCGCTCCAGCTCCGCCATTAACAAGCCCCTCATCAGAAATAACAGAGCTCGTCTTAGAACTACTCTTTGGTTTAAACTCACTCTCACTGCAACAGCTCTTCTAGCTGTCTGCCATGGATTTCTATGCATTTTGGCCTTTGCTAGAGGTGCCCAGATGCCATGGAAGTTAATTGATGCCCTCTTCTGGTTGGTTGAAGCTATAACCCATTTTCTCATTACCATCTTAATTGCCCACGGGAAGAGATTCCAAGCTGTCACCTATCCATTATCGCTTCGGATTTTCTGGGTTGTAAGCTTCATCATCAGTTCATTGTTTACCACTTCTGGGATTATTCGAATCTTCTTCGTGGAAGGATTCGAGGCTTCCAATTTGAGATTGGATGATATTGTCACTTTGGTTACTTTTCCATTATCAGTTGTTCTTCTACTTGTTGGTATCAGAGGATCAACTGGGATTACAGTTGACAGAGAATCTGAACCAGTAATGGATGTGGAAGAGAAATTGTATGAACCTCTTCTGGGAAAATCCAACGTAACTGGCTTTGCTTCAGCTTCTATTTTGTCTAAAGCTTTATGGCTTTGGATGAATCCTTTACTGGGTAAAGGCTACAAATCCCCACTCAAGATTGATGAAATCCCATCCCTTTCGCCAGAACATCGAGCTGAAAGAATGTCAGAGCTCTTTGAATCGAACTGGCCTAAGCCGCATGAAAAATTGAATCACCCGGTCAGAACCACACTGTTCCGGTGTTTCTGGAGGGAGGTTGCTTTCACTGCCTTTCTGGCAATTGTTCGTCTCTGTGTTATATATGTGGGGCCTCTTCTCATCCAAAGATTTGTTGATTTCACGTCAGGGAAAAGAAGCTCCCCTTATGAAGGATACTACCTTGTATTGATTCTCCTCATTGCGAAAACCGTGGAGGTTTTAACATCTCACCATTTTAATTTCAACTCTCAGAAGCTCGGTATGCTTATCCGATCCACTCTCATCACTTCATTATACAGGAAAGGCCTGAGGCTATCATGCTCTGCTCGGCAGGATCATGGGGTTGGACAAATTGTGAATTATATGGCTGTTGATGCTCAGCAGCTCTCTGATATGATGCTTCAGCTACATGCCATATGGTTGATGCCTTTGCAAGTGACTGTTGCCTTAGTGCTTCTTTATAATGAACTTGGTGGTGCCATGATCACAGCAGTAATCGGAATTTTTGCGGTTCTTTTGTTTGTTCTGATGGGCACTCGAAGGAACAACAGATTCCAACACAATGTGATGAAAAATCGTGATTTGAGAATGAAGGCAACTAATGAGATGCTCAATTACATGCGCGTTATCAAGTTCCAGGCGTGGGAAGAGCACTTCAATAAGAGAATTCAATCTTTTCGCGAATCTGAATTTGGATGGCTTACCAAGTTTATGTACTCGATCTCAGGCAATATTATTGTAATGTGGTCAACACCATTAATGATATCGGCTTTCACATTTGCTACTGCGATCATGTTGGGCGTCCAGCTTGATGCAGGGACAGTGTTCACGACAACTTCAATCTTTAAAATCTTGCAGGAGCCAATCAGGGCCTTCCCACAGTCTATGATCTCAATTTCACAAGCAATGATCTCACTGGCCAGGTTGGATAAGTACATGACAAGTAGGGAATTGGTGGAGAGTTCAGTGGAGAGGGAGGAGAGTTGTGATGGTAGAATTGCTGTGGAGGTGAAAGATGGGGTGTTTAGTTGGGATGATGAAGGGAAAGAGGAAGTTTTGAGAAATTTGAATTTTGAGATCAAGAAAGGGGAGCTTGCAGCTATTGTTGGGACAGTTGGGTCGGGGAAATCTTCTCTTCTGGCCTCAGTTCTTGGTGAGATGCATAAAATATCGGGACAGGTCAGGCTTTGTGGGACAACTGCCTATGTGGCACAGACATCATGGATCCAGAACGGGACCATTCAGGAGAACATCCTGTTTGGTTTGCCAATGAACACAGAGAAATACAGGGAAGTTATCAGGGTCTGTTGCTTGGAGAAAGACTTGGAAATGATGGAGTATGGAGATCAAACTGAGATTGGAGAGCGTGGCATCAACCTCAGTGGCGGCCAGAAGCAGCGCATTCAACTTGCAAGAGCTGTTTATCAGGATTGTGATGTCTATCTTCTCGATGATGTCTTTAGCGCTGTGGATGCTCACACTGGGACCGATATATTCAAGGAATGTGTTAGGGGAGCTCTCAGAAACAAGACCATCTTGCTCGTCACCCATCAAGTCGACTTCCTGCACAATGTTGATCTTATCTTAGTGATGAGAGATGGGATGATCGTCCAATCAGGAAAGTACAACGATCTACTAGAATCTGGCATGGATTTTAAAGCACTAGTAGCTGCCCATGAAACCTCCATGGAACTTGTAGAAGAAGCAGGCCCTGCCATCACCAGTGAGAATTCACCCAAACTACCACAATCTCCTCAACCCTTTTCCAACCATGGGGAAGCCAATGGTGTAGACAAGTCTGGAGACCAATCCAAGTCCAATAAAGAATCTTCTAAGCTAATCAAAGATGAGGAGAGGGAAACCGGAAAAGTCAGCTTTCAAGTGTACAAGCAATACTGTACTGAGGCTTATGGGTGGTCGGGATTAGCAGGAGTGTTGCTACTGTCTCTGGCATGGCAGGGGTCTCTCATGGCCAGTGATTACTGGCTAGCATATGAAACTTCAGAAAAGCATGCTAAGTCATTCAACGCATCTTTGTTCATCACCAACTATTCAATTATTGCTGCTGTTTCTGTCCTGTTGATAGTGATCAGATCATTTACTGTCACAAAGCTGGGGCTTAAGACAGCACAGATTTTCTTCTCGCAAATTCTTCACAGCATTCTGCATGCACCCATGTCGTTCTTTGACACAACACCTTCGGGAAGAATCCTTAGTCGGGCATCGACAGATCAAACCAATGTCGATCTCTTTGTACCCTTTTTTATGGCCGTAACCCTTGCCATGTACATCACGCTGCTCAGTATCATCATCATCACTTGTCAATATGCCTGGCCAACGATATTCCTATTAATTCCACTTGGTTGGCTGAATGTTTGGTACCGGGGATACTTTATTGCATCATCTCGGGAAATAACTCGCCTTGACTCAATCACGAAAGCGCCTGTTATCCATCATTTCTCAGAAAGCATCTCTGGAGTTACGACAATCCGCTGTTTCAGGAAGCAGATTGGGTTCACACAGGAAAATGTTCACCGGGTGGATAAGAATTTGCGCATGGATTTCCACAACAATGGATCCAACGAGTGGCTTGGCTTCCGTTTAGAACTGATTGGAAGCTTCATCATGTGTCTTTCAACCATGTTCATGATCTTGTTGCCTAGCAGTATTATAAAGCCAGAGAACGTTGGCTTGTCACTCTCCTACGGGTTGTCCCTCAACAGTGTGCTGTTCTGGGCCATTTACATGAGCTGCTTTGTGGAAAACAAGATGGTTTCTGTTGAGAGGATAAAACAATTCACAAACATTCCATCAGAAGCAGCTTGGCAGATCAAAGACCGTCTTCCTCCTCCAAATTGGCCCACCCATGGCAATGTGGAGCTCAAGGACTTGCAGGTTAGATATCGTCCAAACAGTCCTCTGGTGCTCAAAGGCATTACTCTGAACATTCGAGGGAAAGAGAAGATCGGGGTTGTTGGTCGAACAGGGAGTGGGAAGTCCACTTTAGTCCAGGTGTTCTTTAGGTTGGTGGAGCCTTCAGGGGGGAAGATTATCATTGATGGCATTGATATCGGCATGCTTGGGCTTCATGATCTAAGGTCTCGCTTTGGCATCATTCCTCAAGAACCCGTTCTTTTCGAAGGAACTGTGAGAAGCAACGTGGACCCAGTTGGGCAGTACTCAGATGAAGAAATATGGCAGAGCCTTGAACACTGTCAATTGAAAGAAGTGGTGGCTGGAAAACCCGATAAACTTGATTCACTAGTGGTCGACAATGGAGATAACTGGAGTGTGGGGCAGAGGCAGCTTCTCTGCTTGGGGCGTGTAATGCTGAAGCGCAGCCGGATTTTGTTCTTGGATGAGGCAACTGCTTCTGTTGATTCACAAACAGATGCTGTGATTCAAAGGATCATCCGAGAAGACTTTGCAAACTGCACAATCATCAGCATCGCTCACAGGATACCCACAGTCATGGACTGCGACAGGGTCTTAGTCATAGATGCAGGTAGAGCCAAAGAATTCGACAAACCATCTCGCCTGCTGGAGAGGCATTCCCTGTTTGGGGCACTGGTTCAGGAGTATGCAAACCGCTCAGCAGGAATGTAA 4530 0.4488 MSSASWITTLSCSSSVIASSGETPFSLILQWLRFIFLSPCPQRALLSSIDLLFLLTLIAFSVQKLYSRFISNGRSSSAINKPLIRNNRARLRTTLWFKLTLTATALLAVCHGFLCILAFARGAQMPWKLIDALFWLVEAITHFLITILIAHGKRFQAVTYPLSLRIFWVVSFIISSLFTTSGIIRIFFVEGFEASNLRLDDIVTLVTFPLSVVLLLVGIRGSTGITVDRESEPVMDVEEKLYEPLLGKSNVTGFASASILSKALWLWMNPLLGKGYKSPLKIDEIPSLSPEHRAERMSELFESNWPKPHEKLNHPVRTTLFRCFWREVAFTAFLAIVRLCVIYVGPLLIQRFVDFTSGKRSSPYEGYYLVLILLIAKTVEVLTSHHFNFNSQKLGMLIRSTLITSLYRKGLRLSCSARQDHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQVTVALVLLYNELGGAMITAVIGIFAVLLFVLMGTRRNNRFQHNVMKNRDLRMKATNEMLNYMRVIKFQAWEEHFNKRIQSFRESEFGWLTKFMYSISGNIIVMWSTPLMISAFTFATAIMLGVQLDAGTVFTTTSIFKILQEPIRAFPQSMISISQAMISLARLDKYMTSRELVESSVEREESCDGRIAVEVKDGVFSWDDEGKEEVLRNLNFEIKKGELAAIVGTVGSGKSSLLASVLGEMHKISGQVRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTILLVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAGPAITSENSPKLPQSPQPFSNHGEANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVYKQYCTEAYGWSGLAGVLLLSLAWQGSLMASDYWLAYETSEKHAKSFNASLFITNYSIIAAVSVLLIVIRSFTVTKLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFFMAVTLAMYITLLSIIIITCQYAWPTIFLLIPLGWLNVWYRGYFIASSREITRLDSITKAPVIHHFSESISGVTTIRCFRKQIGFTQENVHRVDKNLRMDFHNNGSNEWLGFRLELIGSFIMCLSTMFMILLPSSIIKPENVGLSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHGNVELKDLQVRYRPNSPLVLKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKIIIDGIDIGMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEVVAGKPDKLDSLVVDNGDNWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAVIQRIIREDFANCTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSRLLERHSLFGALVQEYANRSAGM* 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0326 1509 CDD ABC_6TM_ABCC_D2 950 1242 IPR044726 GO:0140359
Vvi7g0326 1509 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
Vvi7g0326 1509 MobiDBLite consensus disorder prediction 884 909 - -
Vvi7g0326 1509 Gene3D - 1251 1501 IPR027417 -
Vvi7g0326 1509 CDD ABCC_MRP_domain2 1265 1485 - -
Vvi7g0326 1509 Gene3D ABC transporter type 1, transmembrane domain 912 1248 IPR036640 GO:0005524|GO:0016020
Vvi7g0326 1509 Gene3D ABC transporter type 1, transmembrane domain 318 625 IPR036640 GO:0005524|GO:0016020
Vvi7g0326 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1267 1501 IPR003439 GO:0005524
Vvi7g0326 1509 FunFam ABC transporter C family member 4 626 885 - -
Vvi7g0326 1509 FunFam ABC transporter C family member 5 913 1248 - -
Vvi7g0326 1509 FunFam ABC transporter C family member 3 1250 1501 - -
Vvi7g0326 1509 CDD ABCC_MRP_domain1 643 842 - -
Vvi7g0326 1509 Pfam ABC transporter transmembrane region 982 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0326 1509 Pfam ABC transporter transmembrane region 330 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0326 1509 MobiDBLite consensus disorder prediction 878 922 - -
Vvi7g0326 1509 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 255 1502 - -
Vvi7g0326 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 951 1230 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0326 1509 FunFam ABC transporter C family member 10 312 625 - -
Vvi7g0326 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1259 1500 IPR027417 -
Vvi7g0326 1509 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Vvi7g0326 1509 Pfam ABC transporter 1284 1432 IPR003439 GO:0005524
Vvi7g0326 1509 SUPERFAMILY ABC transporter transmembrane region 948 1247 IPR036640 GO:0005524|GO:0016020
Vvi7g0326 1509 Gene3D - 641 873 IPR027417 -
Vvi7g0326 1509 SUPERFAMILY ABC transporter transmembrane region 320 621 IPR036640 GO:0005524|GO:0016020
Vvi7g0326 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 864 IPR027417 -
Vvi7g0326 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 329 609 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0326 1509 SMART AAA_5 1293 1486 IPR003593 GO:0016887
Vvi7g0326 1509 SMART AAA_5 670 851 IPR003593 GO:0016887
Vvi7g0326 1509 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Vvi7g0326 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0326 Vvi-Chr7 3033925 3039689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0326 643 871 Calmodulin-binding Proteins AT2G36910 30.120 6.25e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0326 - K05666 vvi:100253698 2883.59