Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0320 ATGGTTGAAACGAGGCGGAGTTCTTCTTCTTCTAAGAGGCGCCATTCTCCATCTGGGTCGTCTCCTTTACCCAGCGGCAAACGATCCAAGTCGCAGGAGACGGCATCGTCGTCGAGTGAGGTCCCCGGTCCTTTGCCGGAGGAAGCCCTATGTCAGGCGAAGGAATCGGGTTCTGAACATATTGACCAGGCGCCGCAACCATCTGATCCGCCTCGTACCGATACTTCCAAGGCTTCCGATGCATGCGATGTGATTGCGAAGGAGAAGTCTACCGAAGCTGTGGCGGAAGGCGAAGCCTTGGTGGCGGCGTCGCCGTTGCCTTTAGTTGATTCTGCCGTTGGTGGCGAGAAATCGAAGTCTGTTGCCGTGGTGTCGAATCGGGGGAGGAAGCGATCGGTGAAATCCAATGCTACTGTTGCTTGGGGAAAGCTGCTTTCACAGTGTTCTCAGTATCCCCATCAGCCCCTGTGTGGTCCTCTTTTCACTATTGGCCAAAGCCGGGCTAGCAACTTGTCACTGAGAGATCCATCCATTAGTAATACCTTGTGTAGACTGAGGCATATAGAGCGGGGTGGTGCATCTGTTGTTTTACTGGAGATCACAGGAGGGAAAGGTGTTGTCCAAGTAAATGGAAAGATTCACCAGAAGAGTTCCACTTTAATCATAAGTGGTGGTGATGAATTGGTTTTTAGTGCATCTGGTCAACCTGCTTATATCTTCCAGCAGTTCACTAGTGATAACTTAGCTGCCCCGGTCATTCCTTCTTCAGTAAGCATTTTAGAAGCTCAGAGTGCTCCCGTAAAAGGAATACATGTTGAGGCACGATCTGGAGACCCCTCTGCTGTTGCTGGAGCATCAATATTAGCTTCTTTGTCAAATCTACGAAAAGATCTGTCCCTTCTTCCACCTCCTAAAAGTGGTGAGGATGTGCAACAAGGCACTGAAATGACCACGCCACCTTGTGGAGCTTCTGATAGTTGTATACCAGATGCTGACATGAAGGATGCTGAGAATAATGATGTGGCTGGGGTTTCTTCGAGAGAAAAAACTGATGTTCCATCCTCTGAAGCTGCCAACGAAAATCTTAATCTTCAGAGTATCGGACTGGATGCTTGTACGGATACAGAAATTGGAAAAGTCCCTGGGGCAACTTATGAATTAAGGCCGCTCCTGCGGATGCTTGCTGGATCATCTTCTTCCGATTTTGATTTAAGTGGCAGCATTTCAAAGATTCTTGAAGAGCAAAGGGAAATTAGAGAAATCCTCAAGGATTTGGAACCTCCAATGGCTTTGACATCAACAAGACGCCAAGCATTTAAAGATAGTTTACAAGAAGGAATTCTCAGTTCTGATGACATTGAAGTTTCATTTGAAAGTTTCCCATATTACCTGAGTGATACAACAAAGAACGTTTTGATTACTTCCACATACATACATTTGATGCATATTAAATTTGCAAAGTATACCATGGACCTCTCTTCCGTTTGTCCGCGAATTTTACTATCTGGTCCTGCAGGTTCTGAAATATACCAGGAAACTTTGACAAAGGCACTTGCTAAACATTTTACTGCCAGACTGCTTATTGTTGATTCTCTTCTATTGCCTGGTGGATCAACCCCAAAGGATCCTGATCCTGTGAAAGAAAATACGAGGGGTGAAAGAGCATCAATTTTTGCAAAACGAGCTGCACAGGCAGCTGTATTACAGCATAAAAAGCCAGCTTCGAGTGTTGAGGCCGATATTACAGGTGCATCCACAGTAAGCTCTCGAGCTCTGCCGAAGCAGGAGACATCAACTGCTACATCTAAAAACTACATATTCAAAGCAGGTGACAGAGTAAAATTTGTGGGTCCGCCACCTTCTGGATTTTCTCCTATGCCGCCTTTGAGGGGACCAACTAATGGTTATCGAGGCAAAGTACTACTTGCTTTTGAAGAAAATGGATCCTCCAAAATTGGGGTTAGATTTGATAGATCGATTCCGGAAGGGAATGATCTTGGAGGTCTTTGTGAAGATGATCATGGTTTCTTTTGTCCTGCTGATCTACTTCGTTTAGATAGTTCCAGCAGTGATGATGTTGATAAGCTTGCACTCAATGAACTCTTTGAGGTTGCTTCAAATGAAAGTAAAAGCAGCCCTTTGATATTGTTTATAAAAGACATAGAAAAGTCTATAGTGGGAAATCCAGAGGCATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTTGACAATTTACCAGAGAATATAGTTATAATTGGCTCACATACCCAGATGGATAGCCGCAAAGAGAAGTCCCATCCTGGTGGTCTTTTATTCACGAAGTTTGGAAGCAACCAAACAGCTTTACTTGACCTGGCATTTCCGGATAACTTTGGTAGACTGCATGATAGAAGCAAAGAAACCCCCAAGACAATGAAGCAACTCACTCGGCTTTTTCCAAACAAAGTGATGATACAGCTGCCACAGGATGAGTCACTTCTTTTGGATTGGAAGCAGCAGTTGGACCGTGATGGTGAAACTCTAAAAGCACAGGCAAACATTGTTAACATTCGTTCAGTTCTAAATCGCAATGGTTTGGATTGCCCTGACCTTGAGACGCTATCCATAAAAGATCAATCCCTTGCAAGCGATGGTGTGGATAAGTTAGTAGGCTGGGCTTTAAGTTACCACTTTATGCATTGTTCTGATGCCTCCGTCAGAGACTCTAAACTTTTGATTTCCAGTGAAAGTATTAGCTATGGTCTCAATCTTCTACAAGGTATTCAAAGTGAAAGCAAGAGTTTGAAGAAATCCCTCAAGGATGTGGTTACTGAGAATGAATTTGAGAAGAAACTTCTTTCAGATGTTATTCCACCTAGTGATATTGGAGTAACTTTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTGATGCTTCCTCTTCAAAGGCCAGAACTATTTTGTAAGGGACAGCTGACTAAGCCTTGCAAGGGAATTCTTCTATTTGGGCCTCCTGGGACTGGAAAAACAATGCTTGCGAAGGCGGTTGCAACTGAGGCAGGTGCAAATTTTATCAACATATCAATGTCTAGTATCACTTCAAAGTGGTTTGGGGAAGGAGAGAAATATGTCAAAGCTGTGTTCTCTCTAGCTAGTAAAATTGCACCTAGTGTTGTTTTTGTTGACGAGGTTGACAGCATGTTAGGGAGACGTGAAAATCCAGGAGAACATGAAGCTATGAGGAAAATGAAGAATGAGTTCATGGTGAACTGGGATGGCCTACGTACAAAGGATAAAGAACGTGTATTGGTACTTGCCGCCACCAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTACCCAGGAGATTGATGGTGAATTTGCCAGATGCTTTAAATAGAGAGAAAATTCTGAGAGTTATTCTGGCCAAAGAAGAATTGGCACCTGATGTTGGTTTGGAAGCAGTTGCAAATATGACTGATGGGTATTCTGGAAGTGACCTAAAGAATCTTTGTGTGACTGCAGCCCACTGTCCCATAAGAGAGATTTTAGAACGAGAAAAAAAGGAGAAGGCATTAGCATTGGCAGAGAGCAGAGCTTTGCCTGCATTATATTGCAGTACAGACATCCGTCCTTTGAACATTGAGGATTTTAGATATGCGCATGAGCAGGTATGTGCAAGCGTCTCTTCAGAATCTACAAATATGACCGAGCTACTGCAATGGAACGAATTATATGGAGAAGGTGGATCAAGGAAGAGGGCATCCCTCAGCTACTTCATGTAG 3864 0.4268 MVETRRSSSSSKRRHSPSGSSPLPSGKRSKSQETASSSSEVPGPLPEEALCQAKESGSEHIDQAPQPSDPPRTDTSKASDACDVIAKEKSTEAVAEGEALVAASPLPLVDSAVGGEKSKSVAVVSNRGRKRSVKSNATVAWGKLLSQCSQYPHQPLCGPLFTIGQSRASNLSLRDPSISNTLCRLRHIERGGASVVLLEITGGKGVVQVNGKIHQKSSTLIISGGDELVFSASGQPAYIFQQFTSDNLAAPVIPSSVSILEAQSAPVKGIHVEARSGDPSAVAGASILASLSNLRKDLSLLPPPKSGEDVQQGTEMTTPPCGASDSCIPDADMKDAENNDVAGVSSREKTDVPSSEAANENLNLQSIGLDACTDTEIGKVPGATYELRPLLRMLAGSSSSDFDLSGSISKILEEQREIREILKDLEPPMALTSTRRQAFKDSLQEGILSSDDIEVSFESFPYYLSDTTKNVLITSTYIHLMHIKFAKYTMDLSSVCPRILLSGPAGSEIYQETLTKALAKHFTARLLIVDSLLLPGGSTPKDPDPVKENTRGERASIFAKRAAQAAVLQHKKPASSVEADITGASTVSSRALPKQETSTATSKNYIFKAGDRVKFVGPPPSGFSPMPPLRGPTNGYRGKVLLAFEENGSSKIGVRFDRSIPEGNDLGGLCEDDHGFFCPADLLRLDSSSSDDVDKLALNELFEVASNESKSSPLILFIKDIEKSIVGNPEAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDNLPENIVIIGSHTQMDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRSKETPKTMKQLTRLFPNKVMIQLPQDESLLLDWKQQLDRDGETLKAQANIVNIRSVLNRNGLDCPDLETLSIKDQSLASDGVDKLVGWALSYHFMHCSDASVRDSKLLISSESISYGLNLLQGIQSESKSLKKSLKDVVTENEFEKKLLSDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEELAPDVGLEAVANMTDGYSGSDLKNLCVTAAHCPIREILEREKKEKALALAESRALPALYCSTDIRPLNIEDFRYAHEQVCASVSSESTNMTELLQWNELYGEGGSRKRASLSYFM* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0320 1287 MobiDBLite consensus disorder prediction 301 336 - -
Vvi7g0320 1287 MobiDBLite consensus disorder prediction 1 81 - -
Vvi7g0320 1287 Gene3D - 140 250 - -
Vvi7g0320 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 982 1262 IPR027417 -
Vvi7g0320 1287 Pfam ATPase family associated with various cellular activities (AAA) 1023 1152 IPR003959 GO:0005524|GO:0016887
Vvi7g0320 1287 MobiDBLite consensus disorder prediction 13 41 - -
Vvi7g0320 1287 SUPERFAMILY SMAD/FHA domain 141 233 IPR008984 GO:0005515
Vvi7g0320 1287 Gene3D - 981 1261 IPR027417 -
Vvi7g0320 1287 Gene3D - 1155 1249 - -
Vvi7g0320 1287 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 437 1286 - -
Vvi7g0320 1287 Pfam AAA+ lid domain 1176 1211 IPR041569 -
Vvi7g0320 1287 MobiDBLite consensus disorder prediction 59 75 - -
Vvi7g0320 1287 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 981 1157 - -
Vvi7g0320 1287 ProSitePatterns AAA-protein family signature. 1126 1145 IPR003960 GO:0005524|GO:0016887
Vvi7g0320 1287 SMART AAA_5 1019 1156 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0320 Vvi-Chr7 2965213 2990985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0320 1018 1224 Calmodulin-binding Proteins AT3G56690 36.967 2.07e-31 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0320 - - vvi:100260666 2329.67