Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0298 ATGCAGCCCTTTGGACAGATTCCAGTTCTGGAAGATGGCGATTTCACTCTTTTTGAATCTAGAGCAATAACAGCATATTTGGCCGAGAAATACAAGGAAACGGGGTGTGATCTCTTGAGGCACAATGACCTCAAAGAAGCTGCATTGGTGAAGGTATGGTTGGAGGTTGAATCCCAACACTACTATCCTGCAATATACCAGATTGTGTACCAGTTCTTCGCGTTGCCTCTACAAGGCAAGACGGCCGATCAGGCCATTATTGATGTAAATCTGGAGAAGTTGGGTAAGGTTCTGGATGTGTATGAGGCCAGGCTGGGCACCACAAAGTGCCTAGCAGGAGATTTCTACAGCTTGGCTGATCTTCACCACCTTTCTTACACTTACTACTTCATGAAGACGCCATGGGCTTCCCTCATAAACAGCCGTCCCAATGTGAAGGCATGGTGGGACGACATTTCCTCAAGGCCAGCTTTCAAGAAAGTGGCTGAGGGCATGACTTTTGGTGAGAAGTGA 513 0.4737 MQPFGQIPVLEDGDFTLFESRAITAYLAEKYKETGCDLLRHNDLKEAALVKVWLEVESQHYYPAIYQIVYQFFALPLQGKTADQAIIDVNLEKLGKVLDVYEARLGTTKCLAGDFYSLADLHHLSYTYYFMKTPWASLINSRPNVKAWWDDISSRPAFKKVAEGMTFGEK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0298 170 Gene3D - 40 162 - -
Vvi7g0298 170 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 43 170 IPR010987 -
Vvi7g0298 170 SFLD Glutathione Transferase (cytosolic) 2 155 IPR040079 -
Vvi7g0298 170 SUPERFAMILY GST C-terminal domain-like 26 165 IPR036282 -
Vvi7g0298 170 Pfam Glutathione S-transferase, C-terminal domain 69 156 IPR004046 -
Vvi7g0298 170 FunFam Glutathione S-transferase F2 41 162 - -
Vvi7g0298 170 SFLD Main (cytGST) 2 155 - -
Vvi7g0298 170 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 35 IPR004045 -
Vvi7g0298 170 SUPERFAMILY Thioredoxin-like 2 32 IPR036249 -
Vvi7g0298 170 CDD GST_C_Phi 45 162 IPR034347 -
Vvi7g0298 170 Gene3D Glutaredoxin 1 39 - -
Vvi7g0298 170 Pfam Glutathione S-transferase, N-terminal domain 2 29 IPR004045 -
Vvi7g0298 170 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0298 Vvi-Chr7 2812797 2813647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0298 1 168 Glutathione S-transferase Gene Family AT3G62760 63.095 2.53e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0298 K00799 - vvi:100247639 348.206