Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0297 ATGGCGCTCAAGCTCCATGGAATTCCCATGTCCACATGCACCACTCGTGTCCTCACCTGTCTCCATGAGAAAGGCTTGGATTTTGAGCTTGTCCCTGTTAATCTCTTTGCAGGTGAACATAAGCAGCCTCCTTTTCTTGCCAAGAATCCCTTTGGACAGATTCCAGTTCTGGAAGATGGCGATCTCACTCTTTTTGAATCTAGGGCAATAACAGCATATTTGGCCGAGAAATACAAGGAAACGGGGTGTGATCTCTTGAGGCACAATGACCTCAAAGAAGCTGCATTGGTGAAGGTGTGGTTGGAGGTTGAATCCCAACAATATCATCCGGCAATATACCAGATTGTGTACCAGTTCTTCGTGTTGCCTCTACAAGGCAAGACGGCCGATCAGGCCATTATTGATGTAAATCTGGAGAAGTTGGGTAAGGTTCTGGATGTGTATGAGGCCAGGCTGGGCACCACAAAGTGCCTAGCAGGAGATTTCTACAGCTTGGCTGATCTTCACCACCTTTCTTACACTTACTATTTCATGAAGACGCCATGGGCTTCCCTCATAAACAGCCGTCCCAATGTGAAGGCATGGTGGGAGGACATTTCCTCAAGGCCAGCTTTCAAGAAAGTGGCTGAAGGCATGACTTTTGGTGAGAAGTGA 654 0.4755 MALKLHGIPMSTCTTRVLTCLHEKGLDFELVPVNLFAGEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAITAYLAEKYKETGCDLLRHNDLKEAALVKVWLEVESQQYHPAIYQIVYQFFVLPLQGKTADQAIIDVNLEKLGKVLDVYEARLGTTKCLAGDFYSLADLHHLSYTYYFMKTPWASLINSRPNVKAWWEDISSRPAFKKVAEGMTFGEK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0297 217 SFLD Main.5: Phi-like 1 212 - -
Vvi7g0297 217 FunFam Glutathione S-transferase F2 88 209 - -
Vvi7g0297 217 FunFam Glutathione S-transferase F2 2 86 - -
Vvi7g0297 217 Pfam Glutathione S-transferase, C-terminal domain 110 203 IPR004046 -
Vvi7g0297 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vvi7g0297 217 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Vvi7g0297 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 210 - -
Vvi7g0297 217 CDD GST_C_Phi 92 209 IPR034347 -
Vvi7g0297 217 CDD GST_N_Phi 2 77 - -
Vvi7g0297 217 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Vvi7g0297 217 Gene3D - 87 209 - -
Vvi7g0297 217 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Vvi7g0297 217 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Vvi7g0297 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Vvi7g0297 217 Gene3D Glutaredoxin 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0297 Vvi-Chr7 2807029 2808128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0297 1 215 Glutathione S-transferase Gene Family AT3G62760 64.651 1.20e-104 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0297 K00799 - vvi:100242506 447.588