Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0280 ATGTATGCAAGCACTTTCACTGATGGTGTCAAAGATAATGATGATATTCTGGGGGTTCTTTCTCTCATCTTCTACACCCTCATCCTCATCCCTCTCTTCAAGTACGTCTTGATTGTTTTGAAGGCCAATGATAATGGCGATGGAGGGACATTTGCTTTGTATTCTTTTATTTGCCGATATGCCAAGGTGGGGTTGATCCCTAGTCGACAGGCTGAGGACAGAGAAGTCTCCAATTTCCGATTGGAGCTGCCTAGTAAAGGTCTGCAGATTGCATCAAAGCTCAAGTCCAAGCTAGAGAAGAGCAACTTTGCCAAGTTCTTTCTGTTGTTTGCCACAATGCTTGGCACTTCCATGGTGATTGGTGATGGTGTCCTCACTCCTTGCATCTCAGGAATTAGGATGGGTCTCTTGTCTACTAGTGGTACTGCAAAGAAAATGGGATTGTATCTTTGA 453 0.4415 MYASTFTDGVKDNDDILGVLSLIFYTLILIPLFKYVLIVLKANDNGDGGTFALYSFICRYAKVGLIPSRQAEDREVSNFRLELPSKGLQIASKLKSKLEKSNFAKFFLLFATMLGTSMVIGDGVLTPCISGIRMGLLSTSGTAKKMGLYL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0280 150 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 134 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g0280 150 Pfam K+ potassium transporter 4 130 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0280 Vvi-Chr7 2653254 2655542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0280 1 130 Inorganic Solute Cotransporters AT4G13420 65.385 2.95e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0280 K03549 - vvi:100261439 258.455