Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0273 ATGGAGGTGTTGAAAGAGAATATTTCGGAAATCGACATTGGCACCTCTACGGCGTCATTTAAGAAGTTCGTGGATTCGCAGAACGAGCTTTTCAACAGTCAGGTCGACCAGCTCGGCAGCATCGTTCTCAAGCAATGCGAACTCACCGGTGTCAATCCTCTGTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCAAGGGATTTGTTAAACCCTAAGGCTGTAAAGTATATGCAAGCAGTTTTCTCCATTAAAGATGCAATTAGCAAGAAGGAATCACGTGAAATCAGTGCTCTTTTTGGTGTTACAGTCACACAGGTTCGGGAATTTTTTGCTGGTCAACGCTCAAGGGTCAGGAAGGTTGTCCGGTTGTCCAGGGAAAAATCTGTTAGGTCTGATGTATGCAAAGAACTCCAGGATGGGGTCCTAATACCCTCTGATCCCATGATACCTATTGATCAGGCTCCCCTAAACTCCATAGGCCCTAGCAGTGCTGAAGAAGTACCTTCTTGCTCAACACAGGCTGAAGCTTTACATGGGTTAGATGACTCAGAGAGGTATTTCCTGGAGAATATCTTTACTTTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGGAACTGATGGAGTGGATTTTGCAGATGCAAAACTCTTCTGTATTAAATTGGTTTTTAAGTAAAGGTGGAATGATGATTTTAGCAACATGGTTGAGTCAAGCCGCTAACGAAGAGCAAACTAGCGTTCTTCTTGTCATACTTAAGGTTCTTTGTCACCTACCACTACATAAAGCTCTCCCAGTACATATGTCAGCCATACTGCATAGTGTTAATAGACTTCGTTTTTACAGGACATCAGACATATCAAACAGGGCAAGGGTTCTGCTATCAAGATGGAGCAAAATGCTTGCCAGAATCCAACCTATCAAGACATCTAATAGTGCAAAATTGAGCAGTGATGCACAAAGAGAGATAATCATGAAGCAGAGTATTGGTGAAATTATGGGTGATGAGTCATGGAAGTCCGAAATTAATATTCCTGGACAGGCTCTTGCTCCCTTTTGTGAAAATTCAGAAACTGTCAGGAAATTGGAGCCTCTGCAGGCACTGAAATTACTCCCATCATCTGCAGAAGATACAAATAGGAAAAGCATTCGAGGTGTATCTTCATCCCAAACCAGAGAACGCAGAAAGGTTCAGCTAGTAGAACAGCCAGGCCAAAAAACAGCAGGCAGGATCCTGCAGCCTGGAAGAGCAGTCCCTGTGAGTCATGGCCGCCCCATGTCAGCTGATGATATACAGAAAGCAAAAATGCGTGCGCAATTCATGCAGAGCAAATATGGAAAAATAGGTTCATCTTCTAAGGACAAGCATGAAGCAAATAGTGAAGGCCCTAGTAGCAAATCTTCCTCTTCACAAACAAGTACTTTACTTTCAGTGTCCAAAGCTCATGGTCGGCCTAAAATTGAGGAAAACAAGAAACCTGTGACACTTCCTCCCAGAGCTTCTAATAAAGTGGAAGCCTCGCCACAGCCAAAGTTGGAGCTAATGGAAACTTTATTTGAGAAGTGCAAGAAGGTTCAGATCCCATGGCAGGCACCACCAGAAATAAGATTCAATCCTGCCTGGAGGGTGGGCACGGGAGAAAGTAGTAAGGAGGTGGAAGTTCAGAAAAACAGAATCCGCCGGGAGAAGGAAACTGTGTATGAGGCCCTCCAAGATATTCCACCCAATCCCAAGGAGCCCTGGGACCTTGAGATGGATTATGATGACTCCTTGACTCCTGTAATCCCAATTGAGCAGCCCCCTGATGCTGATTCTGCTGCTGAGTCACCGATTCCCCCCGAGCCTGTGGTTGGCCCGGGTGAGACTGAAAAAATTGCAGTTGCTGTTGTTGCTCCAGAGCCCAGCTCTTCATCACATGCTGGCAACGCAAGTAGCAGTAATATTAGTTCTGCAGCTCTACCAGACTTTGAGTTGCTAAGTGTGCTGCTCAAGAACCCTGAACTAGTATTTGCCTTGATGAATGGCCAAGCTGGTAGCCTATCAAGTGAGGATACAGTGAGGCTGTTGGACATGATCAAGGCAAATGGGGTTGGCTCCCTGGGTACTTTGAATGGGTTGGGTAGAAAGGCGGAGGAGAAGGTTGAGGTTTCCCTTCCATCGCCCACTCCATCAAGCAATCCTGTACCTGTACCGAGTGGATGGAGACCAGAATTTGCCAAGAACCCTTTTTCGCGGCAAGGTTTAACGGTGAACAGCAGAGATATGTATGCATCTTCACCAGGAGTTGATTTCACCGGACCTGCACGACAAGTTTCAATGGCCAACATCGATATCACCGGGCCTCCACCCCAAAGGCAGCTTCCCGCCACCAACTTGGTTCTGCCGCCCCAAACTCCGGCTGTCATCCCACCGCCTCAACAACCAGCAAATTTCCCACCATTGTCCCAACAGCCGCCTCCCTCGGCAATGCTGCCATCATTTTCACTCCCTCAAACAACTTCTGTCTTACCTGAAAAGCGACTGCCTTCAACAGTCCCCTCTCTACACCAGAACCCTCCTCCCAACTCTTCGGTTTTGCAGTCAACCACCCCGGAAATAGTCCTCAACATGAACAATTTCCCTGCTGGTGGCATTCCCTTGCCACGCCTATTGGCAGCCGCAGCACCTTCAGTGAGAGTTGAAACCTTAAGCAACCATAAACCCGGATCTGTTGTAATGAATGCACCGGAGAGAGGGCCGATTTCATACTCAGTGCCACAAATGCTGCCAAGGCCAACACGGCCGTTAACACAGCAACAGCCATCATCCATGTTACCACCCGAGCCTCCGCATCCTCTACACCATACTATGCCAATGGGAAATCTAGGCCCTGTGCCGGATTCCTGGAGAGGTAGACAGGGTTTGGCTTCGAATCCTCTTAATCAAAACAATTATAATTTACCGGTTGGAGGAGCTTTGCAGCATCCCCCGCTGACAGCTCCTTCCCGAGAACGAAATGAATATGTGTTTGAGGATGATTTTGAAACATGGAGTCCTGAGGGCAGTCCTAGCAGGACTCCAGAGTACATGTTGGGTGGCCACAACCCTTTGGAGCCCAGAATGAGTTCCGGGCGGAACTATGGGCCTGAGCGACTGAGACACCAGCACCGGAACTCGTCTGGGTACCGGGACCATAATAATAAGTATGGAAACAGGAGGTGGCGCGACCGGAGGCGGTGA 3237 0.4767 MEVLKENISEIDIGTSTASFKKFVDSQNELFNSQVDQLGSIVLKQCELTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVKYMQAVFSIKDAISKKESREISALFGVTVTQVREFFAGQRSRVRKVVRLSREKSVRSDVCKELQDGVLIPSDPMIPIDQAPLNSIGPSSAEEVPSCSTQAEALHGLDDSERYFLENIFTLMRKEETFSGQVELMEWILQMQNSSVLNWFLSKGGMMILATWLSQAANEEQTSVLLVILKVLCHLPLHKALPVHMSAILHSVNRLRFYRTSDISNRARVLLSRWSKMLARIQPIKTSNSAKLSSDAQREIIMKQSIGEIMGDESWKSEINIPGQALAPFCENSETVRKLEPLQALKLLPSSAEDTNRKSIRGVSSSQTRERRKVQLVEQPGQKTAGRILQPGRAVPVSHGRPMSADDIQKAKMRAQFMQSKYGKIGSSSKDKHEANSEGPSSKSSSSQTSTLLSVSKAHGRPKIEENKKPVTLPPRASNKVEASPQPKLELMETLFEKCKKVQIPWQAPPEIRFNPAWRVGTGESSKEVEVQKNRIRREKETVYEALQDIPPNPKEPWDLEMDYDDSLTPVIPIEQPPDADSAAESPIPPEPVVGPGETEKIAVAVVAPEPSSSSHAGNASSSNISSAALPDFELLSVLLKNPELVFALMNGQAGSLSSEDTVRLLDMIKANGVGSLGTLNGLGRKAEEKVEVSLPSPTPSSNPVPVPSGWRPEFAKNPFSRQGLTVNSRDMYASSPGVDFTGPARQVSMANIDITGPPPQRQLPATNLVLPPQTPAVIPPPQQPANFPPLSQQPPPSAMLPSFSLPQTTSVLPEKRLPSTVPSLHQNPPPNSSVLQSTTPEIVLNMNNFPAGGIPLPRLLAAAAPSVRVETLSNHKPGSVVMNAPERGPISYSVPQMLPRPTRPLTQQQPSSMLPPEPPHPLHHTMPMGNLGPVPDSWRGRQGLASNPLNQNNYNLPVGGALQHPPLTAPSRERNEYVFEDDFETWSPEGSPSRTPEYMLGGHNPLEPRMSSGRNYGPERLRHQHRNSSGYRDHNNKYGNRRWRDRRR* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 451 514 - -
Vvi7g0273 1078 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 468 485 - -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 1013 1078 - -
Vvi7g0273 1078 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 382 432 - -
Vvi7g0273 1078 Gene3D - 66 127 - -
Vvi7g0273 1078 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1062 - -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 602 625 - -
Vvi7g0273 1078 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 226 314 IPR035441 -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 926 982 - -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 809 834 - -
Vvi7g0273 1078 SMART HOX_1 68 130 IPR001356 GO:0003677
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 1046 1070 - -
Vvi7g0273 1078 MobiDBLite consensus disorder prediction 809 831 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0273 494 752 Homeobox Transcription Factor Family AT4G02560 46.332 4.00e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0273 - - vvi:100249358 1990.7