Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0270 ATGAACTCATGTGGGTTGTCCCCAGAAAGTGCTTTATCTGCGTCACGGAAGATACAGTTTGAAACCCCAGAAAGAGCAGACTCCGTCCTCGCACTCCTTAGAAATTATGGATGCACCAATACCCATATCTCCAAAATTGTTAGCAAATATCCGCTCCTGCTCACTGCCAATCCTGAGAAGACCCTTTTGCCCAAACTAGAGTTTTTCCGTTCTGTAGGCTTTTCGGGGCCTGATCTTGCCGGTATTATCGTTGCAAAGCCAAGTATCTTGAAAAGGAGCTTGGAAAATCATGTTATTCCTAATTACAATTTCCTCAAGAGCGTAGGTATGATCAATGAAAATATTGCGAGGGCCCTCAGGAGGACTTACTGGCTTACTGGTCAAAGCGTGCAAAACACCAATGTTCCAAATATTGCAACTCTGAAAGAAATTGGAGTTCCCATGTCAAATATTTCGTTTTTTCTGACATGTCACCCTAGTGCAGTGTCCCAAAACAAGGAAAAGTTTAGTACAAATGTCAAGAAGGTTATTGAAATGGGATTTGACCCTTTGAGAGTTACATTTCTGAAAGCAGTTCGCTTGATCTGTGGAATGGGTGAATCAATGTGGGAGCATAAAATGGAGGTTTATAGGCGGTGGGGTTTTACAGATGATGAGATTATGTTGATGATCAGATTGGATCCCTTATGTATGACATCATCTGAGAGGAAAATAATGAGTGTGATGGATTTTTTAGTTAATAAGATGGGTTGGGAACCTGCAGCTATTGGTAGATATCCAACAGTGTTTTTGCGCAGTCTTGAGAAGAAGATCATTCCATGGTGTTCAGTAGTGAAAGTTCTTCAAATAAAGGGGTTGGTGAAGAAGGATCTGAGTTTGAGTTTTTTAGGCTCCAGTAAGAAGAATTTCTTCAATAGGTTTGTGGTGAAATATGAGCATGATGTTCCTGAGCTTTTAAATGTATATCAAGGAAAAATTGGCATTTTGGAACTTGGCTTCATATCTGAGGGGATAATGCGGGATGAAACAGTTGTAGTATCTCAACTTAACAATTCCAAGGGATAG 1065 0.4038 MNSCGLSPESALSASRKIQFETPERADSVLALLRNYGCTNTHISKIVSKYPLLLTANPEKTLLPKLEFFRSVGFSGPDLAGIIVAKPSILKRSLENHVIPNYNFLKSVGMINENIARALRRTYWLTGQSVQNTNVPNIATLKEIGVPMSNISFFLTCHPSAVSQNKEKFSTNVKKVIEMGFDPLRVTFLKAVRLICGMGESMWEHKMEVYRRWGFTDDEIMLMIRLDPLCMTSSERKIMSVMDFLVNKMGWEPAAIGRYPTVFLRSLEKKIIPWCSVVKVLQIKGLVKKDLSLSFLGSSKKNFFNRFVVKYEHDVPELLNVYQGKIGILELGFISEGIMRDETVVVSQLNNSKG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0270 354 Gene3D Transcription termination factor 3, mitochondrial 89 316 IPR038538 -
Vvi7g0270 354 FunFam Mitochondrial transcription termination factor-like 94 315 - -
Vvi7g0270 354 PANTHER CGI-12 PROTEIN-RELATED 2 311 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 Pfam mTERF 30 183 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 Pfam mTERF 197 303 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 186 216 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 152 182 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 80 111 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Vvi7g0270 354 SMART mt_12 253 287 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0270 Vvi-Chr7 2518280 2521053 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi7g0270 mTERF 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0270 K15032 - vvi:100240848 703.745