Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0264 ATGTATAATCAAAGGATTCTAGGGGGACATCATCCCTTGATCGGTTCTTTAGGGGTTCTGTTTGTTTCGATAGAAAATGATTTGGGGAAACATCTTTGGGCAGGGTGGTACATTTCCAAATCGACGTATCTGCTTCTGATTTGTCGATTGTTCGCTGCCTTGCTTTTCTGCAACGGATGCTACAAATTAGGGCTGATCGAGTTTCGGAGCTTTACAATCTTCAAAATTGGTGAGAGAGACGAACATTCTCTAGAAATGAGTACAAGTTTCCTCTGTAAAAGAGTAGTGTCGCTCACAAATGTGGGGCAAATGTTTGAAATTTCAAGGACCCAAATGCATTTTCTTCAAAATACCCAACTTTTGATTTTTAGATCTTTCTCTTCGTCCAAACAACATTCTTTCACAGTGTCTTACCTCATAAACTCATGTGGGTTGTCCCCAGAGAGTGCTTTATCTGCATCACGGAAGGTACAGTTTGAAACCCCAGACGGAGCAGACTCCGTGCTTGCACTCCTTAGAAATTATGGATGCACCAATACCCATATCTCCAAAATTGTAAGCAAGTATCCGCTCCTGCTCATTGCCAATTCTGAGAAAACCCTTTTGCCCAAACTGGAGTTTTTCAGTTCTGCAGGCTTTTCAGGGCCTGACCTTGTCCGTATTGTCGTTGGAAGCCCAAGTATCCTGAAAAGGAGCTTGGAAAACCATCTTATTCCTAGTTATAATTTCCTCAAGAGTATGGATATGGTCCATGAAAATATTGTGAAGGCTTTCAGTAGGTCATACTGGCTTACCGGTAAAAGTGTGCAAGATACCATCGCTTCAAACGTTGAAATTCTGAAAGAAATAGGAGTTCCCATGTCAAATATTTCGTCTTTGGTGGCAATGCACCCTTGTGCAGTGTTCCAAAACAGGGAAAAGTTTAGTAGAAGTGTCGAGAAGGTTTTTGAGATGGGAATCAATCCTTTGAGAGTTACGTTTCTGAAAGCAGTTCAAGTGATCTGTGGAGTGGCTGAATCAATGTGGGAGCATAAAATGCAGGTTTACAGGCAGTGGGGTTTTACAGATGACGAGATTATGTTGATGTTCCGATTGGATCCCTTATGTATAAAGTCATCGGAGAAGAAAATAATGAGTGTGATGGATTTTTTGGTTAATAAGATGGGTTGGGAACCTGCAAGTATTGCTAGATATCCAACAGTCTTTTTGCGAAGTTTGGAGAAGAAGATCATTCCACGGTGTTCAGTAGTGAAAGTTCTTCAAATGAAGGGGTTGGTGAAGAAGGATCTGTGTTTGGGTATTTTAGGCTGCAGTGAAGAGAATTTCTTTGATAAGTTTGTGGTGAAATATGAGCAAGATGTTCCCGAGCTTTTAAATGTATATCAAGGAAAAATTGGTATTTTGGAACTTGGCTTTGTCTCCGAGGGGGTAAGGGAGAAGAAACAGTTGTAG 1452 0.4098 MYNQRILGGHHPLIGSLGVLFVSIENDLGKHLWAGWYISKSTYLLLICRLFAALLFCNGCYKLGLIEFRSFTIFKIGERDEHSLEMSTSFLCKRVVSLTNVGQMFEISRTQMHFLQNTQLLIFRSFSSSKQHSFTVSYLINSCGLSPESALSASRKVQFETPDGADSVLALLRNYGCTNTHISKIVSKYPLLLIANSEKTLLPKLEFFSSAGFSGPDLVRIVVGSPSILKRSLENHLIPSYNFLKSMDMVHENIVKAFSRSYWLTGKSVQDTIASNVEILKEIGVPMSNISSLVAMHPCAVFQNREKFSRSVEKVFEMGINPLRVTFLKAVQVICGVAESMWEHKMQVYRQWGFTDDEIMLMFRLDPLCIKSSEKKIMSVMDFLVNKMGWEPASIARYPTVFLRSLEKKIIPRCSVVKVLQMKGLVKKDLCLGILGCSEENFFDKFVVKYEQDVPELLNVYQGKIGILELGFVSEGVREKKQL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0264 483 Gene3D Transcription termination factor 3, mitochondrial 225 454 IPR038538 -
Vvi7g0264 483 FunFam Mitochondrial transcription termination factor-like 233 454 - -
Vvi7g0264 483 SMART mt_12 291 321 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 183 214 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 325 355 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 392 426 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 SMART mt_12 360 391 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 Pfam mTERF 290 442 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 Pfam mTERF 169 308 IPR003690 GO:0003690|GO:0006355
Vvi7g0264 483 PANTHER CGI-12 PROTEIN-RELATED 129 451 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0264 Vvi-Chr7 2497536 2501762 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi7g0264 mTERF 7.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0264 K15032 - vvi:100245941 785.408