Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0261 ATGTTTGATTTCCTCAGTAGAACACTTCGTCGCTCGGCTCCGAATATTCAGAATTCGTCCTGTTTTCGTGAAAATGTGTCTCTGGTTCTCGTCAGAGGCTTATCATCGTCCTCAAACAAGATATCAAAAGCGGCGGACCAACAGAAACAACACTCTTTTACAGTGTCTTACCTTGTAAATAGATATATCCAGATCGCCAAACTCATCACGAGGCTCCCCAGGTTGGTTTGTTCTGACCCTGAGGAAACCCTTCTCCCCAAAATTGAGTTTTTCAGTTCTATAGGCATTTCAGGCCATGATTTCACTAGGATTGTCACTCAGAATCCAAATATCTGGTTCCGGAGTGTAGAGAAACGATTCGTTCCTTGTTATGATTTTATCAAGAGTATGGTTCTCTCGGAGGATAAAGTGGTTACAACTTTGAAGAGAGCACCTAGGATGCTCATGTGTGATATGCAGACAAGTATTGCTCCCAATATTGCATCGTTGAGGAAGTTTGGAGTGACTCAATCGACTGTGTTGTTTTTGGTGACTGATTATCCCAATATACTGCTGCGGACAAGCGCCAAGTTTGAACAACATGTCAGGGAAGTTGTTGACATGGGATTCGACCCGAAGAAATCAGAATTTGTCCATGCACTGAGAGTGTTTGCTGGGATGAGTGAGTTGAGTCGAGAACGTAAAATGGCGATTTTAGGTGGTTTGCGGGAGGCTGTTGCAAGAGTTCCTTTGGTTCTTTGTTATAGTTTGAATAAGAGGGTAATTCCGAGGTGTTCAATTGTGCAAGTTCTGCAGTCCAAGGGTTTGTTAAAGGAGGCAGATTTTTATTTATCTAGTGTGTTGATACCTCCTGAGAAGGTCATCTTGGCCAGGTTTGTCATCAAATATGAAGAACAAGTTCCTCAGCTGTTGAGTGTCTATAAAGGGAAATTGGGTCTTCCGGAGCTAGGCTTTGGGTCTGAGGGAATGAAACAGTTGTAG 981 0.4302 MFDFLSRTLRRSAPNIQNSSCFRENVSLVLVRGLSSSSNKISKAADQQKQHSFTVSYLVNRYIQIAKLITRLPRLVCSDPEETLLPKIEFFSSIGISGHDFTRIVTQNPNIWFRSVEKRFVPCYDFIKSMVLSEDKVVTTLKRAPRMLMCDMQTSIAPNIASLRKFGVTQSTVLFLVTDYPNILLRTSAKFEQHVREVVDMGFDPKKSEFVHALRVFAGMSELSRERKMAILGGLREAVARVPLVLCYSLNKRVIPRCSIVQVLQSKGLLKEADFYLSSVLIPPEKVILARFVIKYEEQVPQLLSVYKGKLGLPELGFGSEGMKQL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0261 326 Gene3D Transcription termination factor 3, mitochondrial 33 302 IPR038538 -
Vvi7g0261 326 PANTHER CGI-12 PROTEIN-RELATED 238 297 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 Pfam mTERF 64 204 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 SMART mt_12 236 270 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 SMART mt_12 66 97 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Vvi7g0261 326 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0261 Vvi-Chr7 2486496 2487697 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi7g0261 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0261 K15032 - vvi:104879785 610.527