Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0249 ATGGATCATGTGGGTGAGGGGGAGTCAGAGTTGGTATTCAACCCTACAGACGAAGAGATGGTACACTATCTCCTGAATAAGGTGACTGGGAAAACTCCTTTCGTGAGAGAAGTGATTGAATGTGATCTTTATGGAGATGAAGAATTGTGGAGGAAACGAGTCGAAGGAACCCAACGCAATTGTCTTTACTTCTTCACCAAGTTGAAGAAGACGACCCGGAAGATGTCGTGGTCCAGTAGAGCTACTGCATGGTGCAACACTTGGAAGGCACAATCAGACAAGAAGATTTGCATGGGAGAGCAAGTACATATTGGTTCCAAGAGATGTTTCTCGTTGGTGGAGAAGGAAAAGCCCAGAGTGAAGCATGGTTGGGTCATGCATGAGTATAGGCTTGATGGTGTTTATGACTGCTACAATCAAGGCAACGACTACGTTATCTGTAGAATCAAAAGAATGGTTTCAAAGAAAGTAGCAGTAAAGCAACAAGAAGTAGAAGGAGATGATGCCATAGCCATTCAAACAAACTGCAATGAAATCCTTGACCCAAAGGTTACAGTACCGAAGGAGCAAGAAACGGAACCGCCGGGGAGCTCCACACCACAAAGGGAAGATGATTTTTTTGGACAGCAGGAAGAAACTCCACCTAGAGGAGTTGATTTTGCAGAAGGAGGTGGAGGAAACTGGATACAAGCTTTTGCTCAAGACCTTCTGGCCTATTCACAGAACTGTGTGGAAGAGAAAGATGAAGGGGTGGATATGTTGCCCAACCATTTTTACGAAGACAAATGGATAAGAGGTTGGGAAAGGTCATCCACTGACCATAAGCCAAATTGTTAA 837 0.4444 MDHVGEGESELVFNPTDEEMVHYLLNKVTGKTPFVREVIECDLYGDEELWRKRVEGTQRNCLYFFTKLKKTTRKMSWSSRATAWCNTWKAQSDKKICMGEQVHIGSKRCFSLVEKEKPRVKHGWVMHEYRLDGVYDCYNQGNDYVICRIKRMVSKKVAVKQQEVEGDDAIAIQTNCNEILDPKVTVPKEQETEPPGSSTPQREDDFFGQQEETPPRGVDFAEGGGGNWIQAFAQDLLAYSQNCVEEKDEGVDMLPNHFYEDKWIRGWERSSTDHKPNC* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0249 278 Gene3D NAC domain 16 157 IPR036093 GO:0003677|GO:0006355
Vvi7g0249 278 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 177 - -
Vvi7g0249 278 ProSiteProfiles NAC domain profile. 7 152 IPR003441 GO:0003677|GO:0006355
Vvi7g0249 278 MobiDBLite consensus disorder prediction 185 217 - -
Vvi7g0249 278 SUPERFAMILY NAC domain 13 150 IPR036093 GO:0003677|GO:0006355
Vvi7g0249 278 Pfam No apical meristem (NAM) protein 11 131 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0249 13 182 NAC Transcription Factor Family AT3G04060 28.261 3.32e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vvi7g0249 NAM 8.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0249 - - vvi:104879786 595.504