Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0239 ATGGGTCTTAATTCATTAGCGGGACTGGGGATGAGATCTACCTCTGATCAAGTCTCGATAGATGCTATAACCTTGTTTGTGGCTCTCCTTTGTGCTTGCATTGTGATTGGTCATCTTCTCGAGGAGTATAGATGGATGAATGAGTCAATCACTGCCCTTTTTATAGGGTTGTGCACTGGAATTGTTCTCCTATTAACTACAGGAGGAAAGATCTCACTCATTTTACTATTCAATGAGGAACTTTTCTTCATATATCTTCTTCCTCCTATCATATTCAATGCTGGGTTCCAGGTAAAAAAGAAGCAGTTTTTCCGAAACTTTATGACAATCATATTGTTTGGTGCTATTGGTACACTGATATCCTTTGGCATTATATCTCTAGGTGCTATACAATTATTCAAAAAATTGGATATCGGTTTCTTGGAGATAGGGGATTATCTAGCAATTGGAGCAATTTTTTCAGCTACAGATTCTGTTTGCACCTTGCAGGTGCTCAATCAGGATGAGACACCTTTGCTATACAGTCTAGTCTTTGGGGAAGGTGTGGTAAATGATGCCACATCTGTGGTACTTTTCAATGCAATCCAGAGATTTGACCTGTCTCACATCACTTCAGGCATTGCCTTTCAGTTTGTTGGCAATTTTTTGTCTCTATTTTTTGCAAGCACCTTGCTTGGGGTGTTCATTGGATTGCTTAGTGCATACATCATGAAGAAGCTGTATTTTGGAAGGCACTCTACTGATCGTGAAGTTGCACTTATGATTGTCATGGCTTACCTTTCATACATTATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACTGTATTCTTTTGCGGGATTGTCATGTCACACTACACCTGGCATAACGTGACTGAAAGTTCAAGAGTCACCACAAAGCATACTTTTGCAACGTTATCTTTTGTTTCTGAGATTTTTATCTTCCTGTATGTTGGTATTGATGCCTTGGACATTGAGAAGTGGCGGGTTGTAAGCAACAGTCCTGGAACATCAATTGGGGTGAGTTCAATTCTTCTTGGACTGGTTCTAATTGGAAGGGCAGCTTTTGTATTCCCCCTATCCTTTTTATCCAACTTAACTAAGAAATCTGAGAGTGACAAGATTGGGTTCAAGCAACAGATCACAATATGGTGGGCTGGACTCATGCGAGGTGCTGTATCTGTTGCACTTGCTTATAATCAGTTCACTATGTCAGGCCATACCCAACTGAGAGGGAATGCGATCATGATCACCAGCACAATCACAATTGTCCTTTTCAGTACACTGGTGTTTGGCTTGATGACCAAACCCCTTATAAGCTTCTTGCTGCCTCCTCCAAAATACTTCAGCAGCATGATGTCCTCTGAGCCATCTTCTCCAAAATCCTTCTCCATGCCACTTCTCGCCAATGGGCAAGACCCAGATATCGAAGGGGATAGCCACAACACTCCCCCTCCAACCAATCTACGCATGCTCTGGACCACCCCAACTCATACCGTCCACCATTACTGGAGAAAGTTTGACAATGCCTACATGCGACCCGTGTTTGGGGGTAGGGGTTTTGTTCCTTACGTAGCCACTTCACTAACTGAAAGGAATGCCCCTCAACTGCAATGA 1617 0.4236 MGLNSLAGLGMRSTSDQVSIDAITLFVALLCACIVIGHLLEEYRWMNESITALFIGLCTGIVLLLTTGGKISLILLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAIGTLISFGIISLGAIQLFKKLDIGFLEIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQRFDLSHITSGIAFQFVGNFLSLFFASTLLGVFIGLLSAYIMKKLYFGRHSTDREVALMIVMAYLSYIMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVSEIFIFLYVGIDALDIEKWRVVSNSPGTSIGVSSILLGLVLIGRAAFVFPLSFLSNLTKKSESDKIGFKQQITIWWAGLMRGAVSVALAYNQFTMSGHTQLRGNAIMITSTITIVLFSTLVFGLMTKPLISFLLPPPKYFSSMMSSEPSSPKSFSMPLLANGQDPDIEGDSHNTPPPTNLRMLWTTPTHTVHHYWRKFDNAYMRPVFGGRGFVPYVATSLTERNAPQLQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0239 538 PANTHER SODIUM/HYDROGEN EXCHANGER 13 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vvi7g0239 538 Pfam Sodium/hydrogen exchanger family 26 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi7g0239 538 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi7g0239 538 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi7g0239 538 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi7g0239 538 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi7g0239 538 MobiDBLite consensus disorder prediction 460 486 - -
Vvi7g0239 538 Gene3D - 143 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0239 Vvi-Chr7 2309195 2315931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0239 13 537 Antiporters AT3G05030 73.346 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0239 - - vvi:100261462 1037.71